Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.49□□□□□ -1.21
RNF40O75150 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF40O75150 AL078601.3-201ENST00000573303 535 ntBASIC7.49□□□□□ -1.21
RNF40O75150 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF40O75150 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF40O75150 AC015818.6-201ENST00000584274 634 ntBASIC7.49□□□□□ -1.21
RNF40O75150 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF40O75150 BNIP3P16-201ENST00000589779 534 ntBASIC7.49□□□□□ -1.21
RNF40O75150 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
RNF40O75150 AC104695.2-201ENST00000605056 775 ntBASIC7.49□□□□□ -1.21
RNF40O75150 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF40O75150 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF40O75150 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF40O75150 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF40O75150 AC140479.4-205ENST00000636339 820 ntBASIC7.49□□□□□ -1.21
RNF40O75150 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF40O75150 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF40O75150 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF40O75150 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF40O75150 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF40O75150 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF40O75150 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF40O75150 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF40O75150 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF40O75150 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
RNF40O75150 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF40O75150 CDC27P3-201ENST00000635418 1910 ntBASIC7.48□□□□□ -1.21
RNF40O75150 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF40O75150 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF40O75150 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF40O75150 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF40O75150 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF40O75150 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF40O75150 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF40O75150 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
RNF40O75150 AP003471.1-202ENST00000319051 1988 ntBASIC7.48□□□□□ -1.21
RNF40O75150 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.48□□□□□ -1.21
RNF40O75150 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.48□□□□□ -1.21
RNF40O75150 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF40O75150 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF40O75150 AL139276.1-201ENST00000311910 1001 ntBASIC7.48□□□□□ -1.21
RNF40O75150 SNORA62.2-201ENST00000364672 152 ntBASIC7.48□□□□□ -1.21
RNF40O75150 Y_RNA.555-201ENST00000384673 110 ntBASIC7.48□□□□□ -1.21
RNF40O75150 RPL7P60-201ENST00000397636 735 ntBASIC7.48□□□□□ -1.21
RNF40O75150 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.48□□□□□ -1.21
RNF40O75150 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF40O75150 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF40O75150 OR2AS1P-201ENST00000427827 319 ntBASIC7.48□□□□□ -1.21
RNF40O75150 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF40O75150 AL138799.3-201ENST00000438968 350 ntBASIC7.48□□□□□ -1.21
RNF40O75150 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF40O75150 AC009237.4-201ENST00000441078 238 ntBASIC7.48□□□□□ -1.21
RNF40O75150 AC073109.1-201ENST00000445066 978 ntBASIC7.48□□□□□ -1.21
RNF40O75150 CYCSP44-201ENST00000448560 313 ntBASIC7.48□□□□□ -1.21
RNF40O75150 GSTA11P-201ENST00000452866 669 ntBASIC7.48□□□□□ -1.21
RNF40O75150 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC7.48□□□□□ -1.21
RNF40O75150 SRP68P2-201ENST00000456184 254 ntBASIC7.48□□□□□ -1.21
RNF40O75150 RPS16P9-201ENST00000477220 427 ntBASIC7.48□□□□□ -1.21
RNF40O75150 RPL5P22-201ENST00000480199 884 ntBASIC7.48□□□□□ -1.21
RNF40O75150 RN7SL849P-201ENST00000485236 295 ntBASIC7.48□□□□□ -1.21
RNF40O75150 RN7SL518P-201ENST00000491887 280 ntBASIC7.48□□□□□ -1.21
RNF40O75150 TECRP2-201ENST00000503270 928 ntBASIC7.48□□□□□ -1.21
RNF40O75150 AC093311.1-201ENST00000506586 2021 ntBASIC7.48□□□□□ -1.21
RNF40O75150 SCARNA18.2-201ENST00000516882 84 ntBASIC7.48□□□□□ -1.21
RNF40O75150 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF40O75150 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.48□□□□□ -1.21
RNF40O75150 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF40O75150 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.48□□□□□ -1.21
RNF40O75150 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF40O75150 AC012409.4-201ENST00000612923 249 ntBASIC7.48□□□□□ -1.21
RNF40O75150 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF40O75150 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
RNF40O75150 AC012629.3-201ENST00000623397 328 ntBASIC7.48□□□□□ -1.21
RNF40O75150 AL669831.3-213ENST00000636676 183 ntBASIC7.48□□□□□ -1.21
RNF40O75150 AL356585.10-201ENST00000641883 123 ntBASIC7.48□□□□□ -1.21
RNF40O75150 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
RNF40O75150 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF40O75150 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF40O75150 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF40O75150 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF40O75150 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.48□□□□□ -1.21
RNF40O75150 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF40O75150 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF40O75150 AL442128.2-201ENST00000620246 1824 ntBASIC7.48□□□□□ -1.21
RNF40O75150 AL139384.2-201ENST00000613809 3590 ntBASIC7.48□□□□□ -1.21
RNF40O75150 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RNF40O75150 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RNF40O75150 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.47□□□□□ -1.21
RNF40O75150 AL354854.1-201ENST00000455940 1363 ntBASIC7.47□□□□□ -1.21
RNF40O75150 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.47□□□□□ -1.21
RNF40O75150 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
RNF40O75150 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RNF40O75150 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
RNF40O75150 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.47□□□□□ -1.21
RNF40O75150 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.47□□□□□ -1.21
RNF40O75150 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RNF40O75150 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.47□□□□□ -1.21
RNF40O75150 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.47□□□□□ -1.21
RNF40O75150 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.47□□□□□ -1.21
RNF40O75150 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms