Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.32□□□□□ -1.72
SNX3O60493 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX3O60493 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.32□□□□□ -1.72
SNX3O60493 AP000919.1-202ENST00000581139 1264 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC115085.1-201ENST00000588924 229 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AL158050.2-201ENST00000605336 568 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC112503.1-201ENST00000608436 391 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC006946.3-201ENST00000609791 756 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC064801.1-201ENST00000612025 407 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC116447.1-201ENST00000613153 453 ntBASIC4.32□□□□□ -1.72
SNX3O60493 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNX3O60493 AC126175.1-201ENST00000617041 758 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AL121890.3-201ENST00000618494 516 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX3O60493 AC004808.1-201ENST00000627671 721 ntBASIC4.32□□□□□ -1.72
SNX3O60493 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SNX3O60493 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX3O60493 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNX3O60493 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX3O60493 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNX3O60493 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
SNX3O60493 CASC19-261ENST00000641853 1638 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX3O60493 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SNX3O60493 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX3O60493 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX3O60493 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX3O60493 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNX3O60493 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.31□□□□□ -1.72
SNX3O60493 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.31□□□□□ -1.72
SNX3O60493 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX3O60493 RNA5SP502-201ENST00000362694 119 ntBASIC4.31□□□□□ -1.72
SNX3O60493 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX3O60493 AC234772.1-201ENST00000377927 937 ntBASIC4.31□□□□□ -1.72
SNX3O60493 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SNX3O60493 RNU1-89P-201ENST00000384592 164 ntBASIC4.31□□□□□ -1.72
SNX3O60493 RNU6-932P-201ENST00000391108 106 ntBASIC4.31□□□□□ -1.72
SNX3O60493 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX3O60493 UBE2V1P9-201ENST00000414760 368 ntBASIC4.31□□□□□ -1.72
SNX3O60493 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNX3O60493 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX3O60493 AC241520.1-201ENST00000422654 1099 ntBASIC4.31□□□□□ -1.72
SNX3O60493 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX3O60493 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.31□□□□□ -1.72
SNX3O60493 AF228730.2-201ENST00000438784 848 ntBASIC4.31□□□□□ -1.72
SNX3O60493 UBE2V1P3-201ENST00000439651 417 ntBASIC4.31□□□□□ -1.72
SNX3O60493 AC092170.1-201ENST00000440211 356 ntBASIC4.31□□□□□ -1.72
SNX3O60493 HMGB3P9-201ENST00000441799 583 ntBASIC4.31□□□□□ -1.72
SNX3O60493 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX3O60493 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX3O60493 FAR2P1-206ENST00000449736 709 ntBASIC4.31□□□□□ -1.72
SNX3O60493 TPMTP4-201ENST00000450749 678 ntBASIC4.31□□□□□ -1.72
SNX3O60493 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.31□□□□□ -1.72
SNX3O60493 AC008280.2-201ENST00000455473 307 ntBASIC4.31□□□□□ -1.72
SNX3O60493 AC069306.1-201ENST00000507006 843 ntBASIC4.31□□□□□ -1.72
SNX3O60493 IGLVIV-53-201ENST00000520107 367 ntBASIC4.31□□□□□ -1.72
SNX3O60493 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.31□□□□□ -1.72
SNX3O60493 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.31□□□□□ -1.72
SNX3O60493 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.31□□□□□ -1.72
SNX3O60493 CYB5AP5-201ENST00000549779 389 ntBASIC4.31□□□□□ -1.72
SNX3O60493 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX3O60493 AC010735.1-201ENST00000567305 1026 ntBASIC4.31□□□□□ -1.72
SNX3O60493 AC018552.3-201ENST00000567416 561 ntBASIC4.31□□□□□ -1.72
SNX3O60493 MTND4LP24-201ENST00000572277 291 ntBASIC4.31□□□□□ -1.72
SNX3O60493 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX3O60493 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX3O60493 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX3O60493 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX3O60493 AC079395.2-201ENST00000610982 737 ntBASIC4.31□□□□□ -1.72
SNX3O60493 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.31□□□□□ -1.72
SNX3O60493 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX3O60493 U3.53-201ENST00000628922 216 ntBASIC4.31□□□□□ -1.72
SNX3O60493 LINC01808-202ENST00000641680 1116 ntBASIC4.31□□□□□ -1.72
SNX3O60493 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX3O60493 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SNX3O60493 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX3O60493 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNX3O60493 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX3O60493 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX3O60493 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX3O60493 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX3O60493 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SNX3O60493 AC090017.1-201ENST00000548612 1779 ntBASIC4.3□□□□□ -1.72
SNX3O60493 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNX3O60493 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNX3O60493 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX3O60493 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX3O60493 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX3O60493 MIR708-201ENST00000390708 88 ntBASIC4.3□□□□□ -1.72
SNX3O60493 MTATP6P31-201ENST00000406985 692 ntBASIC4.3□□□□□ -1.72
SNX3O60493 RNA5SP178-201ENST00000410380 128 ntBASIC4.3□□□□□ -1.72
SNX3O60493 RSU1P3-201ENST00000412878 835 ntBASIC4.3□□□□□ -1.72
SNX3O60493 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX3O60493 AC246680.2-201ENST00000422106 389 ntBASIC4.3□□□□□ -1.72
SNX3O60493 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX3O60493 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX3O60493 AC073069.1-201ENST00000428657 441 ntBASIC4.3□□□□□ -1.72
SNX3O60493 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNX3O60493 FABP5P3-201ENST00000437960 408 ntBASIC4.3□□□□□ -1.72
SNX3O60493 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms