Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PRKNO60260 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRKNO60260 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRKNO60260 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PRKNO60260 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRKNO60260 AL133268.1-201ENST00000405676 1401 ntBASIC4.29□□□□□ -1.72
PRKNO60260 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.28□□□□□ -1.72
PRKNO60260 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 OR14L1P-202ENST00000641545 3009 ntBASIC4.28□□□□□ -1.72
PRKNO60260 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 KARSP3-201ENST00000571212 1504 ntBASIC4.28□□□□□ -1.72
PRKNO60260 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PRKNO60260 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PRKNO60260 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PRKNO60260 RNU1-83P-201ENST00000363426 164 ntBASIC4.28□□□□□ -1.72
PRKNO60260 RNU1-32P-201ENST00000363937 159 ntBASIC4.28□□□□□ -1.72
PRKNO60260 RNU4-68P-201ENST00000364314 141 ntBASIC4.28□□□□□ -1.72
PRKNO60260 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.28□□□□□ -1.72
PRKNO60260 RNU6-224P-201ENST00000384055 107 ntBASIC4.28□□□□□ -1.72
PRKNO60260 MIR320B1-201ENST00000390209 79 ntBASIC4.28□□□□□ -1.72
PRKNO60260 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PRKNO60260 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.28□□□□□ -1.72
PRKNO60260 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PRKNO60260 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.28□□□□□ -1.72
PRKNO60260 LINC01881-201ENST00000416103 412 ntBASIC4.28□□□□□ -1.72
PRKNO60260 CENPIP1-201ENST00000425713 902 ntBASIC4.28□□□□□ -1.72
PRKNO60260 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.28□□□□□ -1.72
PRKNO60260 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.28□□□□□ -1.72
PRKNO60260 RPL23AP1-201ENST00000428990 471 ntBASIC4.28□□□□□ -1.72
PRKNO60260 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.28□□□□□ -1.72
PRKNO60260 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.28□□□□□ -1.72
PRKNO60260 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.28□□□□□ -1.72
PRKNO60260 AC092170.1-201ENST00000440211 356 ntBASIC4.28□□□□□ -1.72
PRKNO60260 Z77249.1-201ENST00000444622 1175 ntBASIC4.28□□□□□ -1.72
PRKNO60260 MTATP6P26-201ENST00000445926 662 ntBASIC4.28□□□□□ -1.72
PRKNO60260 MTCYBP11-201ENST00000447254 1109 ntBASIC4.28□□□□□ -1.72
PRKNO60260 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.28□□□□□ -1.72
PRKNO60260 SCARNA10-201ENST00000459255 330 ntBASIC4.28□□□□□ -1.72
PRKNO60260 NAP1L1P3-201ENST00000462291 880 ntBASIC4.28□□□□□ -1.72
PRKNO60260 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.28□□□□□ -1.72
PRKNO60260 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.28□□□□□ -1.72
PRKNO60260 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.28□□□□□ -1.72
PRKNO60260 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.28□□□□□ -1.72
PRKNO60260 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.28□□□□□ -1.72
PRKNO60260 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.28□□□□□ -1.72
PRKNO60260 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PRKNO60260 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.28□□□□□ -1.72
PRKNO60260 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.28□□□□□ -1.72
PRKNO60260 AC008083.2-201ENST00000546707 476 ntBASIC4.28□□□□□ -1.72
PRKNO60260 LSM3P2-201ENST00000551246 273 ntBASIC4.28□□□□□ -1.72
PRKNO60260 OR4U1P-201ENST00000554958 912 ntBASIC4.28□□□□□ -1.72
PRKNO60260 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 CCDC58P3-201ENST00000590792 430 ntBASIC4.28□□□□□ -1.72
PRKNO60260 AC124856.1-201ENST00000600819 896 ntBASIC4.28□□□□□ -1.72
PRKNO60260 AL133338.2-201ENST00000604292 736 ntBASIC4.28□□□□□ -1.72
PRKNO60260 AC090525.3-201ENST00000605601 189 ntBASIC4.28□□□□□ -1.72
PRKNO60260 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.28□□□□□ -1.72
PRKNO60260 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.28□□□□□ -1.72
PRKNO60260 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.28□□□□□ -1.72
PRKNO60260 CU459211.1-201ENST00000635667 749 ntBASIC4.28□□□□□ -1.72
PRKNO60260 LINC01808-202ENST00000641680 1116 ntBASIC4.28□□□□□ -1.72
PRKNO60260 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 ZNF137P-201ENST00000456718 1920 ntBASIC4.28□□□□□ -1.72
PRKNO60260 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRKNO60260 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
PRKNO60260 HSPA8P17-201ENST00000427029 1382 ntBASIC4.27□□□□□ -1.73
PRKNO60260 AC104260.2-201ENST00000623551 3497 ntBASIC4.27□□□□□ -1.73
PRKNO60260 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.27□□□□□ -1.73
PRKNO60260 AC108467.2-201ENST00000617640 1597 ntBASIC4.27□□□□□ -1.73
PRKNO60260 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.27□□□□□ -1.73
PRKNO60260 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PRKNO60260 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
PRKNO60260 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRKNO60260 ANKRD36P1-201ENST00000344424 659 ntBASIC4.27□□□□□ -1.73
PRKNO60260 Y_RNA.472-201ENST00000384322 102 ntBASIC4.27□□□□□ -1.73
PRKNO60260 RNU6-1242P-201ENST00000391052 103 ntBASIC4.27□□□□□ -1.73
PRKNO60260 RN7SKP222-201ENST00000410651 315 ntBASIC4.27□□□□□ -1.73
PRKNO60260 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.27□□□□□ -1.73
PRKNO60260 TAF13P2-201ENST00000416876 286 ntBASIC4.27□□□□□ -1.73
PRKNO60260 RPS3AP37-201ENST00000419176 745 ntBASIC4.27□□□□□ -1.73
PRKNO60260 AC022022.1-201ENST00000430304 178 ntBASIC4.27□□□□□ -1.73
PRKNO60260 FTH1P16-201ENST00000435241 552 ntBASIC4.27□□□□□ -1.73
PRKNO60260 MTCYBP31-201ENST00000438855 1122 ntBASIC4.27□□□□□ -1.73
PRKNO60260 RPL23AP93-201ENST00000440847 484 ntBASIC4.27□□□□□ -1.73
PRKNO60260 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.27□□□□□ -1.73
PRKNO60260 AC012512.1-201ENST00000446594 718 ntBASIC4.27□□□□□ -1.73
PRKNO60260 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.27□□□□□ -1.73
PRKNO60260 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms