Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SOX1O00570 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX1O00570 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX1O00570 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX1O00570 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX1O00570 BRD9P1-201ENST00000529855 560 ntBASIC6.36□□□□□ -1.39
SOX1O00570 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX1O00570 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX1O00570 FXNP1-201ENST00000555153 337 ntBASIC6.36□□□□□ -1.39
SOX1O00570 MIR3934-201ENST00000579806 107 ntBASIC6.36□□□□□ -1.39
SOX1O00570 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX1O00570 AC012507.3-201ENST00000603556 477 ntBASIC6.36□□□□□ -1.39
SOX1O00570 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX1O00570 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.36□□□□□ -1.39
SOX1O00570 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SOX1O00570 AC011455.2-201ENST00000599320 3336 ntBASIC6.36□□□□□ -1.39
SOX1O00570 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX1O00570 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX1O00570 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX1O00570 MAPK10-270ENST00000641102 3538 ntBASIC6.36□□□□□ -1.39
SOX1O00570 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX1O00570 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
SOX1O00570 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX1O00570 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX1O00570 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.35□□□□□ -1.39
SOX1O00570 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX1O00570 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX1O00570 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SOX1O00570 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX1O00570 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX1O00570 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX1O00570 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.35□□□□□ -1.39
SOX1O00570 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX1O00570 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX1O00570 Y_RNA.72-201ENST00000362894 103 ntBASIC6.35□□□□□ -1.39
SOX1O00570 Y_RNA.481-201ENST00000384373 102 ntBASIC6.35□□□□□ -1.39
SOX1O00570 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SOX1O00570 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX1O00570 PEX12P1-201ENST00000400284 1048 ntBASIC6.35□□□□□ -1.39
SOX1O00570 Y_RNA.608-201ENST00000410647 95 ntBASIC6.35□□□□□ -1.39
SOX1O00570 RSU1P3-201ENST00000412878 835 ntBASIC6.35□□□□□ -1.39
SOX1O00570 SNRPEP10-201ENST00000420249 274 ntBASIC6.35□□□□□ -1.39
SOX1O00570 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX1O00570 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX1O00570 AC104837.2-201ENST00000427236 424 ntBASIC6.35□□□□□ -1.39
SOX1O00570 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX1O00570 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX1O00570 YWHAQP9-201ENST00000445891 512 ntBASIC6.35□□□□□ -1.39
SOX1O00570 RPS27AP15-201ENST00000447672 466 ntBASIC6.35□□□□□ -1.39
SOX1O00570 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.35□□□□□ -1.39
SOX1O00570 RPS3AP41-201ENST00000462701 778 ntBASIC6.35□□□□□ -1.39
SOX1O00570 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.35□□□□□ -1.39
SOX1O00570 AC008897.1-201ENST00000494006 347 ntBASIC6.35□□□□□ -1.39
SOX1O00570 AC008629.2-201ENST00000503783 483 ntBASIC6.35□□□□□ -1.39
SOX1O00570 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX1O00570 POU5F1P7-201ENST00000508759 541 ntBASIC6.35□□□□□ -1.39
SOX1O00570 NPM1P21-201ENST00000513394 762 ntBASIC6.35□□□□□ -1.39
SOX1O00570 RNU6-1281P-201ENST00000516223 105 ntBASIC6.35□□□□□ -1.39
SOX1O00570 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX1O00570 AC027309.2-201ENST00000520566 192 ntBASIC6.35□□□□□ -1.39
SOX1O00570 HSPA8P13-201ENST00000523715 472 ntBASIC6.35□□□□□ -1.39
SOX1O00570 OR8A2P-201ENST00000528631 952 ntBASIC6.35□□□□□ -1.39
SOX1O00570 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.35□□□□□ -1.39
SOX1O00570 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX1O00570 MIR4307-201ENST00000582802 84 ntBASIC6.35□□□□□ -1.39
SOX1O00570 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX1O00570 AC006116.3-201ENST00000592968 361 ntBASIC6.35□□□□□ -1.39
SOX1O00570 RPL12P25-202ENST00000598100 674 ntBASIC6.35□□□□□ -1.39
SOX1O00570 AC013553.2-201ENST00000604244 589 ntBASIC6.35□□□□□ -1.39
SOX1O00570 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.35□□□□□ -1.39
SOX1O00570 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.35□□□□□ -1.39
SOX1O00570 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX1O00570 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX1O00570 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.35□□□□□ -1.39
SOX1O00570 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX1O00570 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX1O00570 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
SOX1O00570 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.34□□□□□ -1.39
SOX1O00570 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SOX1O00570 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.34□□□□□ -1.39
SOX1O00570 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SOX1O00570 CUBNP3-201ENST00000457461 1784 ntBASIC6.34□□□□□ -1.39
SOX1O00570 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SOX1O00570 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
SOX1O00570 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SOX1O00570 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SOX1O00570 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SOX1O00570 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SOX1O00570 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.34□□□□□ -1.39
SOX1O00570 ZBTB8OSP1-201ENST00000342688 498 ntBASIC6.34□□□□□ -1.39
SOX1O00570 AC005294.1-201ENST00000355509 281 ntBASIC6.34□□□□□ -1.39
SOX1O00570 MIR199B-201ENST00000384849 110 ntBASIC6.34□□□□□ -1.39
SOX1O00570 AL603766.1-201ENST00000407763 664 ntBASIC6.34□□□□□ -1.39
SOX1O00570 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.34□□□□□ -1.39
SOX1O00570 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.34□□□□□ -1.39
SOX1O00570 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.34□□□□□ -1.39
SOX1O00570 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.34□□□□□ -1.39
SOX1O00570 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.34□□□□□ -1.39
SOX1O00570 USP9YP36-201ENST00000424581 829 ntBASIC6.34□□□□□ -1.39
SOX1O00570 SDCBPP2-201ENST00000424643 885 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms