Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.8□□□□□ -1.8
UPK1AO00322 MIR3939-201ENST00000582614 106 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
UPK1AO00322 AC011477.5-201ENST00000586571 259 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.8□□□□□ -1.8
UPK1AO00322 AL451044.1-201ENST00000604867 238 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.8□□□□□ -1.8
UPK1AO00322 AC010608.2-201ENST00000624830 470 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.8□□□□□ -1.8
UPK1AO00322 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
UPK1AO00322 UBE3AP2-201ENST00000429033 2259 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UPK1AO00322 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
UPK1AO00322 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UPK1AO00322 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.79□□□□□ -1.8
UPK1AO00322 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.79□□□□□ -1.8
UPK1AO00322 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.79□□□□□ -1.8
UPK1AO00322 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
UPK1AO00322 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
UPK1AO00322 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
UPK1AO00322 OR11H4-201ENST00000315409 1082 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UPK1AO00322 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
UPK1AO00322 SNORA60-201ENST00000362396 134 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
UPK1AO00322 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
UPK1AO00322 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.79□□□□□ -1.8
UPK1AO00322 ST13P16-201ENST00000401760 781 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.79□□□□□ -1.8
UPK1AO00322 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.79□□□□□ -1.8
UPK1AO00322 AC022022.1-201ENST00000430304 178 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 AC096638.2-201ENST00000434965 711 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 RPS4XP4-201ENST00000443195 763 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.79□□□□□ -1.8
UPK1AO00322 AC010618.1-201ENST00000469924 477 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 RPL7P24-201ENST00000493052 752 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
UPK1AO00322 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
UPK1AO00322 NARSP2-201ENST00000518524 679 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.79□□□□□ -1.8
UPK1AO00322 AC025857.1-201ENST00000525252 377 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.79□□□□□ -1.8
UPK1AO00322 AC025627.2-201ENST00000576220 160 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 AC069366.1-201ENST00000583159 838 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 GMCL1P2-201ENST00000605230 823 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 MIR6748-201ENST00000610433 71 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.79□□□□□ -1.8
UPK1AO00322 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.79□□□□□ -1.8
UPK1AO00322 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.79□□□□□ -1.8
UPK1AO00322 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
UPK1AO00322 OR52H1-202ENST00000641796 1061 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UPK1AO00322 LINC00561-201ENST00000565815 2738 ntBASIC3.79□□□□□ -1.8
UPK1AO00322 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1AO00322 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.78□□□□□ -1.8
UPK1AO00322 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1AO00322 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1AO00322 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.78□□□□□ -1.8
UPK1AO00322 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
UPK1AO00322 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1AO00322 MIR365B-201ENST00000362317 111 ntBASIC3.78□□□□□ -1.8
UPK1AO00322 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.78□□□□□ -1.8
UPK1AO00322 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.78□□□□□ -1.8
UPK1AO00322 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.78□□□□□ -1.8
UPK1AO00322 AMZ2P2-201ENST00000406819 1057 ntBASIC3.78□□□□□ -1.8
UPK1AO00322 HSPE1P12-201ENST00000412576 301 ntBASIC3.78□□□□□ -1.8
UPK1AO00322 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.78□□□□□ -1.8
UPK1AO00322 AC108032.1-201ENST00000416706 207 ntBASIC3.78□□□□□ -1.8
UPK1AO00322 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.78□□□□□ -1.8
UPK1AO00322 MRPL50P1-201ENST00000431951 384 ntBASIC3.78□□□□□ -1.8
UPK1AO00322 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.78□□□□□ -1.8
UPK1AO00322 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.78□□□□□ -1.8
UPK1AO00322 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.78□□□□□ -1.8
UPK1AO00322 AC092691.2-201ENST00000461787 803 ntBASIC3.78□□□□□ -1.8
UPK1AO00322 RN7SL271P-201ENST00000487601 295 ntBASIC3.78□□□□□ -1.8
UPK1AO00322 AP000926.3-201ENST00000497201 299 ntBASIC3.78□□□□□ -1.8
UPK1AO00322 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.78□□□□□ -1.8
UPK1AO00322 MRPL49P2-201ENST00000521066 465 ntBASIC3.78□□□□□ -1.8
UPK1AO00322 AC090819.1-201ENST00000523800 1111 ntBASIC3.78□□□□□ -1.8
UPK1AO00322 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.78□□□□□ -1.8
UPK1AO00322 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1AO00322 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.78□□□□□ -1.8
UPK1AO00322 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.78□□□□□ -1.8
UPK1AO00322 AL592494.3-201ENST00000609485 464 ntBASIC3.78□□□□□ -1.8
UPK1AO00322 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.78□□□□□ -1.8
UPK1AO00322 AC107027.3-201ENST00000565095 3473 ntBASIC3.78□□□□□ -1.8
UPK1AO00322 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1AO00322 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1AO00322 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.78□□□□□ -1.8
UPK1AO00322 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1AO00322 USP9YP4-201ENST00000424401 1745 ntBASIC3.78□□□□□ -1.8
UPK1AO00322 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.78□□□□□ -1.8
UPK1AO00322 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.78□□□□□ -1.8
UPK1AO00322 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1AO00322 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1AO00322 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.78□□□□□ -1.8
UPK1AO00322 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
UPK1AO00322 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
UPK1AO00322 OR10AB1P-202ENST00000641219 1686 ntBASIC3.78□□□□□ -1.81
UPK1AO00322 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms