Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC106806.2-201ENST00000509365 500 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 ATP1B1P1-201ENST00000509767 915 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 OR5H4P-201ENST00000510851 923 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC110775.1-201ENST00000513721 462 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 RNA5SP75-201ENST00000516841 111 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC113191.1-201ENST00000517759 403 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 IGKV2D-19-201ENST00000523346 262 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC011602.1-201ENST00000546484 331 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 SYF2P1-201ENST00000550658 413 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 MEG8-217ENST00000556637 924 ntTSL 5 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 TGIF1P1-201ENST00000558095 802 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 MIR4738-201ENST00000579134 87 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 MIR1273E-201ENST00000581165 102 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC011477.5-201ENST00000586571 259 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC016877.3-201ENST00000606778 504 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC092354.2-201ENST00000607786 514 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC064801.1-201ENST00000612025 407 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 uc_338.29-201ENST00000615099 168 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AL139089.1-201ENST00000620372 975 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AL355578.1-201ENST00000607405 1328 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC007256.1-201ENST00000392253 2765 ntBASIC2.15□□□□□ -2.06
CHKB-CPT1BH3BT56 AL356274.2-201ENST00000624379 3752 ntBASIC2.15□□□□□ -2.06
CHKB-CPT1BH3BT56 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.15□□□□□ -2.06
CHKB-CPT1BH3BT56 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.15□□□□□ -2.06
CHKB-CPT1BH3BT56 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC023490.2-201ENST00000359859 470 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 CCNB2P1-201ENST00000399411 1150 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 RNA5SP293-201ENST00000410527 113 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC007563.3-201ENST00000433233 371 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AL049745.1-201ENST00000433953 286 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AL627308.1-201ENST00000435693 821 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL23AP46-201ENST00000438548 490 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL23AP93-201ENST00000440847 484 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC093166.3-201ENST00000448785 303 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 MRPS31P2-201ENST00000451581 518 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL36AP13-201ENST00000457490 317 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL35AP15-201ENST00000468042 339 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL21P103-201ENST00000479921 488 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC006483.1-201ENST00000487308 313 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 SNRPCP11-201ENST00000492453 205 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL36AP41-201ENST00000493820 306 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL29P14-201ENST00000495837 428 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 HMGB1P21-201ENST00000502313 581 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 SCARNA22-201ENST00000503991 125 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 BX510359.5-201ENST00000515651 304 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 RN7SKP21-201ENST00000516503 220 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC068657.1-201ENST00000520807 306 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC112191.2-201ENST00000522428 333 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AP000619.3-201ENST00000535634 1127 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC006064.5-201ENST00000541782 248 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AL049779.2-201ENST00000553847 315 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC010547.6-201ENST00000571789 193 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 MIR4474-201ENST00000579189 78 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 MIR3934-201ENST00000579806 107 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AF186192.2-204ENST00000581667 524 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms