Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 CBX1P1-201ENST00000440184 427 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 RPL23AP93-201ENST00000440847 484 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 XKRYP5-201ENST00000449659 483 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 SCARNA10-201ENST00000459255 330 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 AC011276.1-201ENST00000469688 323 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 AC010468.3-201ENST00000508225 458 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 RNU6-1102P-201ENST00000516149 96 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 SNORA31.13-201ENST00000516624 135 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 AC025918.2-201ENST00000558683 763 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 ATP5J2P6-201ENST00000565203 266 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 AL671309.1-201ENST00000603750 544 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 KATNBL1P5-201ENST00000605015 517 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 AC007390.2-201ENST00000606229 3803 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 AC016717.3-201ENST00000624730 554 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 AP001002.1-201ENST00000625148 1513 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 MTND4P26-201ENST00000415971 1359 ntBASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NPIPA2E9PIF3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AC092435.4-201ENST00000623012 4159 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 USP9YP4-201ENST00000424401 1745 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AC026951.1-201ENST00000559530 2459 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AL353743.4-201ENST00000422653 1547 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 GCNT6-201ENST00000379591 934 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 HMGB1P13-201ENST00000406019 642 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 MTCO3P4-201ENST00000419236 787 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 RPL23AP23-201ENST00000452590 471 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 CYCSP53-201ENST00000455540 265 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 RPL23AP24-201ENST00000458203 385 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AC104687.1-201ENST00000485829 412 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AC018797.3-201ENST00000513388 1241 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 TOMM20P2-201ENST00000540082 421 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AC106785.3-201ENST00000564064 847 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AC023575.1-201ENST00000580510 358 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 KPNA2P3-201ENST00000584190 848 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AL590392.1-201ENST00000604960 446 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 SNORD91B-202ENST00000608459 222 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 OR6R2P-201ENST00000609216 300 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AC004825.2-201ENST00000616634 455 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AC000123.2-201ENST00000623124 461 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 LINC01808-202ENST00000641680 1116 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 PNPT1P2-201ENST00000456768 2050 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AL391684.1-202ENST00000641293 1636 ntBASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.13□□□□□ -1.75
NPIPA2E9PIF3 AL133268.1-201ENST00000405676 1401 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 MFSD8-242ENST00000641690 4199 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms