Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 RNU6-560P-201ENST00000364007 108 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 RNA5SP428-201ENST00000365129 132 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 NCSTNP1-201ENST00000406229 144 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 RPL6P29-201ENST00000414863 865 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AL133482.1-201ENST00000415988 498 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 RHOT1P3-201ENST00000436571 331 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC092013.1-201ENST00000438795 332 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 YWHAQP9-201ENST00000445891 512 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 ELOCP30-201ENST00000447108 299 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 HMGB1P16-201ENST00000447155 540 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC079776.3-201ENST00000450665 370 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC093267.1-201ENST00000489176 961 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC022133.1-201ENST00000490961 571 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 RN7SL346P-201ENST00000491561 294 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC008897.1-201ENST00000494006 347 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 IGBP1P5-201ENST00000507524 1000 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC011352.1-201ENST00000512300 793 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 BTF3P13-201ENST00000513224 490 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 MRPS33P3-201ENST00000513456 322 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 SCARNA20.4-201ENST00000516969 131 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AP001317.1-201ENST00000531194 960 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 GCSHP4-201ENST00000538792 439 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC068993.1-201ENST00000546724 589 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 BGLT3-201ENST00000564523 994 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC109446.2-201ENST00000567872 497 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC069545.1-201ENST00000605671 358 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AL450489.1-201ENST00000612071 468 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC015712.7-201ENST00000615211 635 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC022509.4-201ENST00000621404 572 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 ATE1-AS1-202ENST00000636460 506 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 DDX18P5-201ENST00000534547 1306 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AP000756.2-201ENST00000624168 2567 ntBASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC187A0A096LP49 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 AC026951.1-201ENST00000559530 2459 ntBASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 AL031595.2-201ENST00000624215 19071 ntBASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 AC107027.3-201ENST00000565095 3473 ntBASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 RNU5A-2P-201ENST00000384337 116 ntBASIC4.92□□□□□ -1.62
CCDC187A0A096LP49 SNORA66-201ENST00000384792 133 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms