Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 SNORA17.1-201ENST00000362945 126 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 SNORA11B-201ENST00000408175 129 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 RPL23AP27-201ENST00000415161 451 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 MTND5P25-201ENST00000430499 799 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 RPL36P19-201ENST00000430744 301 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 MTND1P32-201ENST00000433043 938 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 Z92846.1-201ENST00000456203 268 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 snoU13.7-201ENST00000459220 104 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 RPL7P18-201ENST00000478965 734 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 HMGB1P21-201ENST00000502313 581 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 SNRPCP2-201ENST00000504370 475 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 AC010587.2-201ENST00000511727 448 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 AC018797.3-201ENST00000513388 1241 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 HMGN2P6-201ENST00000551091 273 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 DUXAP1-201ENST00000556632 463 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 MIR3691-201ENST00000578066 90 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 MTCYBP13-201ENST00000578634 1093 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 AC131235.4-201ENST00000609288 620 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 MIR7155-201ENST00000615925 56 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 AC007490.1-201ENST00000624321 703 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 OR4A15-201ENST00000314706 1035 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 SNORA74A-201ENST00000364089 198 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 RNU6-621P-201ENST00000364752 109 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 Y_RNA.311-201ENST00000365068 96 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 RNU6-921P-201ENST00000384361 107 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 RNU6-441P-201ENST00000384545 106 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 MIR506-201ENST00000384998 124 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 MIR765-201ENST00000390226 114 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 RN7SKP213-201ENST00000410746 298 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 RPL7P34-201ENST00000433316 712 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 RPS20P21-201ENST00000466859 343 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AC010301.1-201ENST00000473936 355 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 RPSAP50-201ENST00000481955 852 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 RPL7P41-201ENST00000485823 957 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 RN7SKP31-201ENST00000516354 278 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AC027369.5-201ENST00000533838 755 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AC024940.3-201ENST00000538551 316 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 TAS2R6P-201ENST00000605022 826 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AL158042.1-201ENST00000605338 460 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AC010857.1-201ENST00000606398 594 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 MIR6839-201ENST00000620425 113 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AC098679.5-201ENST00000624394 571 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AC116618.1-201ENST00000634617 774 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AC093671.1-201ENST00000624981 2929 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 AC023421.1-201ENST00000590535 1785 ntBASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A3BPQ9Y5P4 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms