Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 RPL12P18-201ENST00000437175 325 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 CALM1P2-201ENST00000452941 448 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 HSPE1P22-201ENST00000456856 327 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AK3P4-201ENST00000504283 583 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC091868.1-201ENST00000508746 304 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 MED28P5-201ENST00000528254 438 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC087477.6-201ENST00000559595 843 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC145350.1-201ENST00000567426 208 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 MTND3P13-201ENST00000574391 343 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AL512782.1-201ENST00000603093 364 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AP002782.1-201ENST00000623107 614 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AP002791.1-201ENST00000623291 381 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC138907.10-201ENST00000623708 983 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC139713.2-214ENST00000642059 1811 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC008549.2-201ENST00000333482 706 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 ANKRD36P1-201ENST00000344424 659 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 RNU6-525P-201ENST00000363685 104 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 RNA5SP27-201ENST00000363839 119 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 RNU4-28P-201ENST00000364739 141 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 RNU6-224P-201ENST00000384055 107 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 MIR513B-201ENST00000385136 84 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 RNU1-82P-201ENST00000390851 165 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 U3.35-201ENST00000408405 208 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 RN7SKP100-201ENST00000411258 284 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC092638.1-201ENST00000411966 1275 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 LINC01347-201ENST00000417964 355 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 E2F6P2-201ENST00000420708 748 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 EIF4HP2-201ENST00000424380 563 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 HIGD1AP4-201ENST00000430194 280 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 MTND5P25-201ENST00000430499 799 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AL592437.1-201ENST00000443781 492 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 RPL34P26-201ENST00000445636 354 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 Z95327.1-201ENST00000446082 482 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 OR51B8P-201ENST00000449892 769 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 NAP1L1P3-201ENST00000462291 880 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 SCARNA22-201ENST00000503991 125 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 RN7SKP276-201ENST00000516242 268 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 RNU1-6P-201ENST00000516290 144 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 FKBP1BP1-201ENST00000553366 325 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AL109741.3-201ENST00000561748 592 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC009097.3-201ENST00000563557 1018 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC106785.1-201ENST00000565935 262 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 VN1R85P-201ENST00000601587 426 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC005962.2-201ENST00000611427 652 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC091304.6-201ENST00000619761 202 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms