Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGC4Q9Y5F7 CYP2G2P-201ENST00000594920 1485 ntBASIC6.51□□□□□ -1.37
PCDHGC4Q9Y5F7 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHGC4Q9Y5F7 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHGC4Q9Y5F7 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHGC4Q9Y5F7 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHGC4Q9Y5F7 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDHGC4Q9Y5F7 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
PCDHGC4Q9Y5F7 AC139426.3-201ENST00000605648 2059 ntBASIC6.51□□□□□ -1.37
PCDHGC4Q9Y5F7 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHGC4Q9Y5F7 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.51□□□□□ -1.37
PCDHGC4Q9Y5F7 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHGC4Q9Y5F7 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDHGC4Q9Y5F7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AL359976.1-201ENST00000418655 3528 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AL354854.1-201ENST00000455940 1363 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 Y_RNA.46-201ENST00000362695 102 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 RN7SKP44-201ENST00000363602 316 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 RNA5SP77-201ENST00000365394 120 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 MT-TG-201ENST00000387429 68 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AL591416.1-201ENST00000404015 867 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AL139805.1-201ENST00000407837 289 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 SLC35E1P1-201ENST00000419313 864 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 RSU1P2-202ENST00000437884 485 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 TCEA1P1-201ENST00000449716 880 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 CACYBPP2-201ENST00000453625 678 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 HMGN2P26-201ENST00000463169 339 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AC090142.1-201ENST00000465776 462 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 RPL12P31-201ENST00000478433 450 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AL135752.1-201ENST00000479477 471 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 RPSAP51-201ENST00000497462 645 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 RNA5SP418-201ENST00000515951 117 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 SNORA25.17-201ENST00000517184 124 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 OR5M2P-201ENST00000529003 936 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AC063950.1-201ENST00000552036 308 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 HMGB1P6-201ENST00000569046 646 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AC138207.8-204ENST00000579588 527 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 RPL26P30-202ENST00000602923 645 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 RFPL4AP6-201ENST00000616792 846 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AC009237.17-201ENST00000618111 748 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AL132640.3-201ENST00000630473 177 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AC010149.2-201ENST00000637608 315 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 AC022507.1-201ENST00000548349 1505 ntBASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGC4Q9Y5F7 RAD17P2-201ENST00000451754 1977 ntBASIC6.49□□□□□ -1.37
PCDHGC4Q9Y5F7 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.49□□□□□ -1.37
PCDHGC4Q9Y5F7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGC4Q9Y5F7 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGC4Q9Y5F7 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
PCDHGC4Q9Y5F7 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
PCDHGC4Q9Y5F7 AC074141.1-201ENST00000588129 2995 ntBASIC6.49□□□□□ -1.37
PCDHGC4Q9Y5F7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGC4Q9Y5F7 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGC4Q9Y5F7 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGC4Q9Y5F7 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGC4Q9Y5F7 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHGC4Q9Y5F7 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGC4Q9Y5F7 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGC4Q9Y5F7 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms