Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 SETP6-201ENST00000479329 568 ntBASIC4.96□□□□□ -1.62
SCN11AQ9UI33 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 AC008011.1-201ENST00000545989 227 ntBASIC4.96□□□□□ -1.62
SCN11AQ9UI33 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 AP000255.1-201ENST00000610276 676 ntBASIC4.96□□□□□ -1.62
SCN11AQ9UI33 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.95□□□□□ -1.62
SCN11AQ9UI33 LINC00561-201ENST00000565815 2738 ntBASIC4.95□□□□□ -1.62
SCN11AQ9UI33 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SCN11AQ9UI33 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SCN11AQ9UI33 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SCN11AQ9UI33 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCN11AQ9UI33 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCN11AQ9UI33 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.95□□□□□ -1.62
SCN11AQ9UI33 PTMAP5-201ENST00000393073 333 ntBASIC4.95□□□□□ -1.62
SCN11AQ9UI33 AC115115.1-201ENST00000449927 248 ntBASIC4.95□□□□□ -1.62
SCN11AQ9UI33 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.95□□□□□ -1.62
SCN11AQ9UI33 AC006511.1-201ENST00000470614 315 ntBASIC4.95□□□□□ -1.62
SCN11AQ9UI33 AC005726.1-201ENST00000494679 427 ntBASIC4.95□□□□□ -1.62
SCN11AQ9UI33 OR8I1P-201ENST00000529291 931 ntBASIC4.95□□□□□ -1.62
SCN11AQ9UI33 GNRHR2P1-201ENST00000555315 631 ntBASIC4.95□□□□□ -1.62
SCN11AQ9UI33 HMGN2P47-201ENST00000559378 272 ntBASIC4.95□□□□□ -1.62
SCN11AQ9UI33 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.95□□□□□ -1.62
SCN11AQ9UI33 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SCN11AQ9UI33 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SCN11AQ9UI33 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCN11AQ9UI33 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SCN11AQ9UI33 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN11AQ9UI33 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SCN11AQ9UI33 DDX18P4-201ENST00000511690 1966 ntBASIC4.94□□□□□ -1.62
SCN11AQ9UI33 RNA5SP146-201ENST00000410743 123 ntBASIC4.94□□□□□ -1.62
SCN11AQ9UI33 ATP5A1P2-201ENST00000412323 255 ntBASIC4.94□□□□□ -1.62
SCN11AQ9UI33 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.94□□□□□ -1.62
SCN11AQ9UI33 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.94□□□□□ -1.62
SCN11AQ9UI33 PLGLA-201ENST00000465668 449 ntBASIC4.94□□□□□ -1.62
SCN11AQ9UI33 ARL4AP1-201ENST00000503220 705 ntBASIC4.94□□□□□ -1.62
SCN11AQ9UI33 AC074250.1-201ENST00000511117 192 ntBASIC4.94□□□□□ -1.62
SCN11AQ9UI33 RAC1P2-201ENST00000511164 579 ntBASIC4.94□□□□□ -1.62
SCN11AQ9UI33 RNA5SP208-201ENST00000516156 78 ntBASIC4.94□□□□□ -1.62
SCN11AQ9UI33 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.94□□□□□ -1.62
SCN11AQ9UI33 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.94□□□□□ -1.62
SCN11AQ9UI33 RPL21P12-201ENST00000559810 515 ntBASIC4.94□□□□□ -1.62
SCN11AQ9UI33 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.94□□□□□ -1.62
SCN11AQ9UI33 AL442067.2-201ENST00000614033 363 ntBASIC4.94□□□□□ -1.62
SCN11AQ9UI33 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN11AQ9UI33 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SCN11AQ9UI33 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN11AQ9UI33 AC074029.4-201ENST00000624796 1859 ntBASIC4.94□□□□□ -1.62
SCN11AQ9UI33 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SCN11AQ9UI33 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.94□□□□□ -1.62
SCN11AQ9UI33 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.94□□□□□ -1.62
SCN11AQ9UI33 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN11AQ9UI33 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 MTND2P15-201ENST00000418575 892 ntBASIC4.93□□□□□ -1.62
SCN11AQ9UI33 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 HLA-N-201ENST00000437516 135 ntBASIC4.93□□□□□ -1.62
SCN11AQ9UI33 AC084198.1-201ENST00000477747 402 ntBASIC4.93□□□□□ -1.62
SCN11AQ9UI33 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 RN7SKP13-201ENST00000515933 244 ntBASIC4.93□□□□□ -1.62
SCN11AQ9UI33 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 RPL7AP73-201ENST00000413490 353 ntBASIC4.93□□□□□ -1.62
SCN11AQ9UI33 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 HSFY1P1-201ENST00000423928 1178 ntBASIC4.93□□□□□ -1.62
SCN11AQ9UI33 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SCN11AQ9UI33 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SCN11AQ9UI33 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
SCN11AQ9UI33 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN11AQ9UI33 IL6STP1-201ENST00000346911 1020 ntBASIC4.92□□□□□ -1.62
SCN11AQ9UI33 MIR490-201ENST00000384865 128 ntBASIC4.92□□□□□ -1.62
SCN11AQ9UI33 RNA5SP306-201ENST00000411087 107 ntBASIC4.92□□□□□ -1.62
SCN11AQ9UI33 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.92□□□□□ -1.62
SCN11AQ9UI33 CYCSP32-201ENST00000440548 321 ntBASIC4.92□□□□□ -1.62
SCN11AQ9UI33 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN11AQ9UI33 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.92□□□□□ -1.62
SCN11AQ9UI33 CAB39P1-201ENST00000502277 460 ntBASIC4.92□□□□□ -1.62
SCN11AQ9UI33 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.92□□□□□ -1.62
SCN11AQ9UI33 IGKV2-38-201ENST00000517443 247 ntBASIC4.92□□□□□ -1.62
SCN11AQ9UI33 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN11AQ9UI33 AC005412.1-201ENST00000580812 1049 ntBASIC4.92□□□□□ -1.62
SCN11AQ9UI33 MIR3922-201ENST00000585192 84 ntBASIC4.92□□□□□ -1.62
SCN11AQ9UI33 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms