Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 OR8F1P-201ENST00000425243 930 ntBASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 AL591623.2-201ENST00000449978 222 ntBASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 AC010469.1-201ENST00000463864 576 ntBASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 AC113430.1-201ENST00000506872 718 ntBASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 AL451044.1-201ENST00000604867 238 ntBASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 AC010300.1-201ENST00000600671 5134 ntBASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPC1L1Q9UHC9 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NPC1L1Q9UHC9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NPC1L1Q9UHC9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 BMS1P3-201ENST00000372011 932 ntBASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 RNU4-6P-201ENST00000410804 122 ntBASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 PTP4A1P1-201ENST00000420539 515 ntBASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 VN1R34P-201ENST00000447387 883 ntBASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 AL358232.1-201ENST00000448030 501 ntBASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 AL162151.2-201ENST00000448875 158 ntBASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 RNA5SP154-201ENST00000516193 111 ntBASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 AC008802.1-201ENST00000519121 791 ntBASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 AL358913.1-201ENST00000554342 121 ntBASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 AC015722.2-201ENST00000622210 551 ntBASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 AC124312.6-202ENST00000623624 418 ntBASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 AP000542.2-201ENST00000623199 6179 ntBASIC5.4□□□□□ -1.55
NPC1L1Q9UHC9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 MIR1251-201ENST00000408552 70 ntBASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 CYCSP19-201ENST00000411715 316 ntBASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 TPTE2P3-201ENST00000441562 1189 ntBASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 AC098583.1-201ENST00000480875 255 ntBASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 VN1R105P-201ENST00000486595 910 ntBASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 MYL12AP1-201ENST00000518490 515 ntBASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 AC012603.1-201ENST00000606424 528 ntBASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 AL161912.2-201ENST00000565707 3007 ntBASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPC1L1Q9UHC9 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 AC096644.3-201ENST00000416788 338 ntBASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 ELOCP18-201ENST00000434209 337 ntBASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 HMGB1P37-201ENST00000439613 609 ntBASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 RRM2P4-201ENST00000441721 562 ntBASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 MTCYBP14-201ENST00000457471 715 ntBASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 AC008676.3-201ENST00000521237 435 ntBASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 MIR4286-201ENST00000580651 93 ntBASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 MIR6500-201ENST00000622700 86 ntBASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 CDRT1-208ENST00000630868 794 ntBASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPC1L1Q9UHC9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 AC245100.2-201ENST00000454544 1679 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms