Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC010435.1-201ENST00000623353 1177 ntBASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC053481.2-202ENST00000582394 1500 ntBASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 BDP1P-201ENST00000582658 1990 ntBASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC009313.2-201ENST00000417893 1941 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 CYP1D1P-201ENST00000416662 1433 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 FAM3C2-201ENST00000312214 681 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 TPT1P2-201ENST00000413105 503 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 RPL7AP73-201ENST00000413490 353 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 HIGD1AP4-201ENST00000430194 280 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 HMGB1P37-201ENST00000439613 609 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 AL356535.1-201ENST00000440335 398 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 ELOCP10-201ENST00000440624 327 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 RPL23AP2-201ENST00000471227 466 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 PRELID3BP7-201ENST00000503606 469 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 AC111000.5-201ENST00000506559 1178 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 AC109458.1-201ENST00000508858 316 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 AC026726.1-201ENST00000512859 601 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 RAB9BP1-201ENST00000519581 626 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 C1GALT1P3-201ENST00000522049 819 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 DEFB109D-201ENST00000529497 240 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 CYCSP29-201ENST00000533731 318 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 OR8X1P-201ENST00000534542 869 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 AC091516.1-201ENST00000549191 703 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 AC011477.5-201ENST00000586571 259 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 ELOCP34-201ENST00000604436 327 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 MIR6868-201ENST00000611215 58 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 AC078899.5-201ENST00000612475 178 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 RMST_9.1-201ENST00000619945 193 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 AL139089.1-201ENST00000620372 975 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 AC007390.2-201ENST00000606229 3803 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 UBE3AP2-201ENST00000429033 2259 ntBASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS29Q9UBQ0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 MAPK10-373ENST00000641983 6772 ntBASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 Z73965.1-201ENST00000623412 2297 ntBASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 OR11H5P-202ENST00000641612 1325 ntBASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 RAC1P3-201ENST00000416129 580 ntBASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 AC244033.1-201ENST00000426826 870 ntBASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 AC006463.2-201ENST00000473326 348 ntBASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 AC092079.1-201ENST00000558620 1985 ntBASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 AL049555.1-201ENST00000562834 1933 ntBASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 AC114546.3-201ENST00000623582 1734 ntBASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 AL445437.1-201ENST00000623157 3087 ntBASIC3.81□□□□□ -1.8
VPS29Q9UBQ0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS29Q9UBQ0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VPS29Q9UBQ0 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS29Q9UBQ0 AMZ2P2-201ENST00000406819 1057 ntBASIC3.8□□□□□ -1.8
VPS29Q9UBQ0 RNU6-603P-201ENST00000411403 107 ntBASIC3.8□□□□□ -1.8
VPS29Q9UBQ0 AC016397.1-201ENST00000412463 242 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms