Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 AL590609.2-201ENST00000421430 368 ntBASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 RANP8-201ENST00000444720 713 ntBASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 AC005008.1-201ENST00000456151 612 ntBASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 RPL6P9-201ENST00000466502 859 ntBASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 RN7SL601P-201ENST00000471221 293 ntBASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.17□□□□□ -1.58
PHRF1Q9P1Y6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PHRF1Q9P1Y6 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.17□□□□□ -1.58
PHRF1Q9P1Y6 ARL4AP1-201ENST00000503220 705 ntBASIC5.17□□□□□ -1.58
PHRF1Q9P1Y6 HMGN1P11-201ENST00000508668 303 ntBASIC5.17□□□□□ -1.58
PHRF1Q9P1Y6 AC022695.1-201ENST00000522089 237 ntBASIC5.17□□□□□ -1.58
PHRF1Q9P1Y6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.17□□□□□ -1.58
PHRF1Q9P1Y6 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PHRF1Q9P1Y6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.17□□□□□ -1.58
PHRF1Q9P1Y6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.17□□□□□ -1.58
PHRF1Q9P1Y6 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.17□□□□□ -1.58
PHRF1Q9P1Y6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PHRF1Q9P1Y6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PHRF1Q9P1Y6 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 UBDP1-202ENST00000457888 382 ntBASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 RPL31P61-201ENST00000496160 376 ntBASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 AC084759.1-201ENST00000561168 290 ntBASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 AC007066.2-202ENST00000566531 914 ntBASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 AC026979.4-201ENST00000606555 645 ntBASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PHRF1Q9P1Y6 RNU1-33P-201ENST00000364249 162 ntBASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 RPL7P60-201ENST00000397636 735 ntBASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 SNORA3.3-201ENST00000408712 125 ntBASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 SNORA3C-201ENST00000408792 125 ntBASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 HMGB1P37-201ENST00000439613 609 ntBASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 AC090589.1-201ENST00000473109 362 ntBASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 RNA5SP164-201ENST00000516533 110 ntBASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 OR5B10P-201ENST00000532869 642 ntBASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 AC016839.1-201ENST00000578162 867 ntBASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 AC068020.1-201ENST00000594215 661 ntBASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 AC092354.2-201ENST00000607786 514 ntBASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 AL355365.1-201ENST00000616480 294 ntBASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 AL121890.2-201ENST00000617644 465 ntBASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 AL392088.2-201ENST00000637607 285 ntBASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
PHRF1Q9P1Y6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PHRF1Q9P1Y6 ZNF833P-201ENST00000424938 1494 ntBASIC5.15□□□□□ -1.59
PHRF1Q9P1Y6 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
PHRF1Q9P1Y6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC5.15□□□□□ -1.59
PHRF1Q9P1Y6 AC073387.1-201ENST00000453261 709 ntBASIC5.15□□□□□ -1.59
PHRF1Q9P1Y6 BX510359.1-201ENST00000456973 237 ntBASIC5.15□□□□□ -1.59
PHRF1Q9P1Y6 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.15□□□□□ -1.59
PHRF1Q9P1Y6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PHRF1Q9P1Y6 DEFB109D-201ENST00000529497 240 ntBASIC5.15□□□□□ -1.59
PHRF1Q9P1Y6 MIR8058-201ENST00000615737 89 ntBASIC5.15□□□□□ -1.59
PHRF1Q9P1Y6 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.15□□□□□ -1.59
PHRF1Q9P1Y6 AC008079.2-201ENST00000623543 20396 ntBASIC5.15□□□□□ -1.59
PHRF1Q9P1Y6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PHRF1Q9P1Y6 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PHRF1Q9P1Y6 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PHRF1Q9P1Y6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PHRF1Q9P1Y6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.14□□□□□ -1.59
PHRF1Q9P1Y6 AL122016.1-201ENST00000403365 367 ntBASIC5.14□□□□□ -1.59
PHRF1Q9P1Y6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.14□□□□□ -1.59
PHRF1Q9P1Y6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.14□□□□□ -1.59
PHRF1Q9P1Y6 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms