Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNA5SP362-201ENST00000516048 118 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 RNU6-1308P-201ENST00000516817 103 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AL110118.1-201ENST00000553543 400 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AC016180.1-201ENST00000567945 403 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 SNORD95-201ENST00000579879 68 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AC068020.1-201ENST00000594215 661 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AC017076.1-201ENST00000607613 578 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AC019131.2-201ENST00000609071 870 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AC138907.10-201ENST00000623708 983 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AL445984.1-201ENST00000637834 659 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 ZNF90P1-201ENST00000480493 1951 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 CR788268.1-201ENST00000603931 1809 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AL627171.1-201ENST00000618845 1308 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AL451142.2-201ENST00000429076 2090 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 RNA5SP322-201ENST00000363617 119 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 RNU1-89P-201ENST00000384592 164 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 RN7SKP56-201ENST00000410513 331 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 TATDN1P1-201ENST00000414123 891 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AL158825.1-201ENST00000414735 521 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 CHEK2P3-201ENST00000416118 248 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AL160175.1-201ENST00000428124 247 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 FO393414.1-201ENST00000428697 1184 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AC007559.1-201ENST00000428736 355 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AL121776.1-201ENST00000429337 372 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 RPL12P46-201ENST00000436610 195 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 RPL7P28-201ENST00000437739 740 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AC016831.4-201ENST00000438302 307 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 OR1H1P-201ENST00000448731 937 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 HMGB1P5-202ENST00000451497 985 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 IFNWP4-201ENST00000453148 294 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 CYCSP20-201ENST00000473154 315 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AC079841.1-201ENST00000481228 950 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AC107398.1-201ENST00000486904 505 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 CDH12P2-201ENST00000504393 298 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 HIGD1AP18-201ENST00000520730 278 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AC087888.1-201ENST00000550884 1254 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 MIR4760-201ENST00000585040 80 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 RPAP2P1-201ENST00000603626 1168 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AP001033.2-201ENST00000609701 1003 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AC009163.6-201ENST00000612367 342 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AL512624.1-201ENST00000613638 469 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 AC022467.1-201ENST00000614738 749 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 LINC01739-205ENST00000641890 573 ntBASIC4.22□□□□□ -1.73
NDE1Q9NXR1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NDE1Q9NXR1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms