Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 MIR199A2-201ENST00000385289 110 ntBASIC4.14□□□□□ -1.75
CISHQ9NSE2 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CISHQ9NSE2 BX119904.1-201ENST00000432026 348 ntBASIC4.14□□□□□ -1.75
CISHQ9NSE2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 Z74696.2-201ENST00000436514 498 ntBASIC4.14□□□□□ -1.75
CISHQ9NSE2 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 OR9M1P-201ENST00000459641 921 ntBASIC4.14□□□□□ -1.75
CISHQ9NSE2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 RPS26P15-201ENST00000488067 348 ntBASIC4.14□□□□□ -1.75
CISHQ9NSE2 AC093267.1-201ENST00000489176 961 ntBASIC4.14□□□□□ -1.75
CISHQ9NSE2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CISHQ9NSE2 RN7SL703P-201ENST00000578485 302 ntBASIC4.14□□□□□ -1.75
CISHQ9NSE2 MIR4286-201ENST00000580651 93 ntBASIC4.14□□□□□ -1.75
CISHQ9NSE2 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 AC005255.1-201ENST00000593748 216 ntBASIC4.14□□□□□ -1.75
CISHQ9NSE2 AP003392.5-201ENST00000607857 415 ntBASIC4.14□□□□□ -1.75
CISHQ9NSE2 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 AL731566.2-201ENST00000618971 317 ntBASIC4.14□□□□□ -1.75
CISHQ9NSE2 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
CISHQ9NSE2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CISHQ9NSE2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CISHQ9NSE2 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 RN7SKP224-201ENST00000364140 325 ntBASIC4.13□□□□□ -1.75
CISHQ9NSE2 RNA5SP479-201ENST00000364858 117 ntBASIC4.13□□□□□ -1.75
CISHQ9NSE2 RNU6-729P-201ENST00000384399 107 ntBASIC4.13□□□□□ -1.75
CISHQ9NSE2 AC136624.1-201ENST00000400791 413 ntBASIC4.13□□□□□ -1.75
CISHQ9NSE2 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 HMGB3P22-202ENST00000451823 572 ntBASIC4.13□□□□□ -1.75
CISHQ9NSE2 AL161747.1-201ENST00000480068 358 ntBASIC4.13□□□□□ -1.75
CISHQ9NSE2 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 AC002456.2-201ENST00000509356 380 ntBASIC4.13□□□□□ -1.75
CISHQ9NSE2 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.13□□□□□ -1.75
CISHQ9NSE2 RNU6-352P-201ENST00000516908 107 ntBASIC4.13□□□□□ -1.75
CISHQ9NSE2 RN7SKP5-201ENST00000517045 272 ntBASIC4.13□□□□□ -1.75
CISHQ9NSE2 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 AC018442.3-201ENST00000523025 183 ntBASIC4.13□□□□□ -1.75
CISHQ9NSE2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CISHQ9NSE2 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 AF001550.2-201ENST00000636643 217 ntBASIC4.13□□□□□ -1.75
CISHQ9NSE2 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CISHQ9NSE2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CISHQ9NSE2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CISHQ9NSE2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CISHQ9NSE2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CISHQ9NSE2 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CISHQ9NSE2 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CISHQ9NSE2 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CISHQ9NSE2 AL356317.1-201ENST00000396110 1436 ntBASIC4.12□□□□□ -1.75
CISHQ9NSE2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.12□□□□□ -1.75
CISHQ9NSE2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CISHQ9NSE2 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CISHQ9NSE2 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CISHQ9NSE2 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CISHQ9NSE2 RNU6-1320P-201ENST00000390838 107 ntBASIC4.12□□□□□ -1.75
CISHQ9NSE2 RNU6-1269P-201ENST00000391139 107 ntBASIC4.12□□□□□ -1.75
CISHQ9NSE2 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.12□□□□□ -1.75
CISHQ9NSE2 AC092447.2-201ENST00000435487 669 ntBASIC4.12□□□□□ -1.75
CISHQ9NSE2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.12□□□□□ -1.75
CISHQ9NSE2 CYCSP53-201ENST00000455540 265 ntBASIC4.12□□□□□ -1.75
CISHQ9NSE2 RNU6-599P-201ENST00000459383 107 ntBASIC4.12□□□□□ -1.75
CISHQ9NSE2 RNU6-1193P-201ENST00000459461 107 ntBASIC4.12□□□□□ -1.75
CISHQ9NSE2 RN7SL323P-201ENST00000494712 295 ntBASIC4.12□□□□□ -1.75
CISHQ9NSE2 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.12□□□□□ -1.75
CISHQ9NSE2 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.12□□□□□ -1.75
CISHQ9NSE2 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CISHQ9NSE2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.12□□□□□ -1.75
CISHQ9NSE2 AC090877.1-201ENST00000561418 344 ntBASIC4.12□□□□□ -1.75
CISHQ9NSE2 VN1R85P-201ENST00000601587 426 ntBASIC4.12□□□□□ -1.75
CISHQ9NSE2 AC009704.2-201ENST00000618739 483 ntBASIC4.12□□□□□ -1.75
CISHQ9NSE2 RNU6-368P-201ENST00000620928 107 ntBASIC4.12□□□□□ -1.75
CISHQ9NSE2 RNU6-538P-201ENST00000622329 107 ntBASIC4.12□□□□□ -1.75
CISHQ9NSE2 FP236240.3-201ENST00000623061 327 ntBASIC4.12□□□□□ -1.75
CISHQ9NSE2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.12□□□□□ -1.75
CISHQ9NSE2 BDP1P-201ENST00000582658 1990 ntBASIC4.12□□□□□ -1.75
CISHQ9NSE2 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CISHQ9NSE2 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CISHQ9NSE2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms