Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 PGBD4P4-201ENST00000509673 613 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AC106872.4-201ENST00000510050 523 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 OR5M2P-201ENST00000529003 936 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AC090079.2-201ENST00000575289 768 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AC073091.2-201ENST00000603205 907 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AC079880.2-201ENST00000603790 1213 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AC104662.1-201ENST00000604448 511 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 BNIP3P19-201ENST00000605397 577 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AL512329.2-201ENST00000607350 548 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AP001033.2-201ENST00000609701 1003 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AC055764.2-201ENST00000610089 670 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AP005264.7-201ENST00000625003 745 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 LINC02471-203ENST00000641941 4752 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AC006971.1-201ENST00000407916 4486 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 MIR16-2-201ENST00000362117 81 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 RN7SKP162-201ENST00000363605 345 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 MIR3074-201ENST00000384885 81 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AC093719.1-202ENST00000392735 373 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 HMGB1P10-201ENST00000395823 563 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 MIR1286-201ENST00000408112 78 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 RPL35AP15-201ENST00000468042 339 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AC093763.2-201ENST00000505334 1223 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AC133963.2-201ENST00000513686 578 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AC113192.3-201ENST00000529152 742 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AC004825.1-201ENST00000555068 586 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AL109741.3-201ENST00000561748 592 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AC007225.2-201ENST00000562529 256 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AF230666.2-201ENST00000602328 725 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AL133338.2-201ENST00000604292 736 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 MIR6768-201ENST00000610734 72 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 BMS1P21-201ENST00000634565 365 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 MARK2P15-201ENST00000432204 2186 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 AC092162.3-201ENST00000624511 1624 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 IPO8P1-201ENST00000455509 3109 ntBASIC4.35□□□□□ -1.71
VIPAS39Q9H9C1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 AC097374.1-203ENST00000400783 485 ntBASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 HMGB1P13-201ENST00000406019 642 ntBASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 AP000534.2-201ENST00000412729 568 ntBASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 AC093698.1-201ENST00000423843 571 ntBASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 VN1R42P-201ENST00000424651 344 ntBASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 AL353597.2-202ENST00000434901 373 ntBASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 RPS27P5-201ENST00000444247 244 ntBASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 BX284632.1-201ENST00000478218 541 ntBASIC4.34□□□□□ -1.71
VIPAS39Q9H9C1 METTL15P1-201ENST00000481421 1045 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms