Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MIR548P-201ENST00000408336 84 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 RPS3AP38-201ENST00000435889 763 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 AC079922.1-201ENST00000443291 359 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 CBX5P1-201ENST00000468470 561 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 RPS3AP50-201ENST00000487064 803 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 RPL21P42-201ENST00000488408 464 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 RPL7L1P7-201ENST00000509986 724 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 SNORD60.2-201ENST00000516883 86 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 AC079075.1-201ENST00000559543 878 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 OR4H6P-201ENST00000563771 921 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 AC090241.1-201ENST00000587732 621 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 OR7E19P-202ENST00000589942 844 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 FXYD6P1-201ENST00000604857 285 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 AL136097.3-201ENST00000611097 505 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 AC090971.5-201ENST00000621102 293 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 AC103564.3-201ENST00000621194 220 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 AC061999.1-201ENST00000624454 177 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 AC135068.11-201ENST00000636378 921 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.59□□□□□ -1.35
PHACTR1Q9C0D0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
PHACTR1Q9C0D0 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.59□□□□□ -1.36
PHACTR1Q9C0D0 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
PHACTR1Q9C0D0 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC090220.1-201ENST00000593078 1699 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 Y_RNA.144-201ENST00000363521 113 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 GAPDHP42-201ENST00000406848 981 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 SLC35E1P1-201ENST00000419313 864 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC130509.1-201ENST00000464158 433 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 RPS16P9-201ENST00000477220 427 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 PCBP2P3-201ENST00000509726 843 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC093249.1-201ENST00000567049 203 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC090312.1-201ENST00000580637 348 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC115621.1-201ENST00000604653 858 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 RPL12P48-201ENST00000605620 304 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC090948.1-201ENST00000607464 549 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 BX664608.1-201ENST00000610519 487 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC233309.1-201ENST00000619522 751 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AC068831.8-201ENST00000620171 435 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AL121985.3-201ENST00000620690 523 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 MRPL57P1-201ENST00000621486 265 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 NUP58P1-201ENST00000502546 1738 ntBASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHACTR1Q9C0D0 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms