Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 LINC00901.1-201ENST00000617252 152 ntBASIC4.45□□□□□ -1.7
PDLIM5Q96HC4 AL445493.3-201ENST00000619568 477 ntBASIC4.45□□□□□ -1.7
PDLIM5Q96HC4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.45□□□□□ -1.7
PDLIM5Q96HC4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.45□□□□□ -1.7
PDLIM5Q96HC4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.45□□□□□ -1.7
PDLIM5Q96HC4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PDLIM5Q96HC4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDLIM5Q96HC4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.45□□□□□ -1.7
PDLIM5Q96HC4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDLIM5Q96HC4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PDLIM5Q96HC4 AC010928.1-201ENST00000592477 1447 ntBASIC4.45□□□□□ -1.7
PDLIM5Q96HC4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AC083899.2-201ENST00000423285 1376 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AC092435.4-201ENST00000623012 4159 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 SCN1A-220ENST00000641603 12506 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 RNA5SP22-201ENST00000365393 109 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 MIR550A3-201ENST00000390735 95 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AL049697.2-201ENST00000403708 294 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AL078604.1-201ENST00000404609 466 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 RPL21P108-201ENST00000413857 481 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 MTND2P9-201ENST00000422293 931 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 UBE2V1P6-201ENST00000430840 422 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 CDY14P-201ENST00000431260 1014 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 CDY12P-201ENST00000440679 1015 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 RNFT1P2-201ENST00000443064 757 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 CDY13P-201ENST00000445813 1015 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AC073587.1-201ENST00000447093 876 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 CDY23P-201ENST00000451661 1014 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AC012671.1-201ENST00000451912 203 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AC015908.1-201ENST00000478739 476 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AC012158.1-204ENST00000483430 465 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 STMN1P2-201ENST00000508435 439 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 OR7H2P-201ENST00000513483 306 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AC133963.2-201ENST00000513686 578 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 RNA5SP360-201ENST00000516555 118 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AC074029.1-201ENST00000552531 1044 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 GLRXP2-201ENST00000555594 321 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AC006249.1-201ENST00000621223 471 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 AC106858.1-201ENST00000637497 429 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 DCAF13P3-201ENST00000561147 1334 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 NXPH1-205ENST00000602349 1953 ntBASIC4.44□□□□□ -1.7
PDLIM5Q96HC4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AC139769.1-204ENST00000472297 1931 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 NOL8P1-201ENST00000508336 3529 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 RNA5SP307-201ENST00000362863 116 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 RNA5SP391-201ENST00000363456 119 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 RNA5SP28-201ENST00000363841 119 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 RNU1-63P-201ENST00000383902 164 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 HDGFP1-201ENST00000405943 252 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 GAPDHP49-201ENST00000421421 961 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AL590762.4-201ENST00000425885 253 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AC008065.1-201ENST00000428525 348 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 NPM1P34-201ENST00000428821 893 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 USP9YP9-201ENST00000429406 715 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 HSFY7P-201ENST00000432672 318 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 HSFY8P-201ENST00000437934 318 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms