Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC017083.1-201ENST00000428093 483 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 RPS11P1-201ENST00000451072 473 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AC090686.1-201ENST00000481577 749 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AC005726.1-201ENST00000494679 427 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AC020914.6-201ENST00000594327 272 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AC130352.1-201ENST00000602979 661 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 MTCO3P22-201ENST00000603219 784 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AL160290.3-201ENST00000604869 165 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AC100778.3-201ENST00000580060 1750 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 OR56A5-201ENST00000340110 738 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 RNA5SP267-201ENST00000364893 126 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AL831737.1-201ENST00000441288 271 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AC018635.1-201ENST00000468292 1030 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AC097462.2-201ENST00000504623 481 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AC005520.3-201ENST00000602874 370 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AC023509.5-201ENST00000617434 807 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 FRG1EP-201ENST00000634469 770 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 MTND4LP20-201ENST00000402379 270 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AC008065.1-201ENST00000428525 348 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AP000563.1-201ENST00000490865 758 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AC012493.2-201ENST00000595083 291 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AC006077.1-201ENST00000604746 343 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AC008966.2-201ENST00000606157 453 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AL031666.3-201ENST00000609320 1006 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AC090246.1-201ENST00000616499 426 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 RNA5SP97-201ENST00000365006 84 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 RNA5SP126-201ENST00000365092 109 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AC007066.1-201ENST00000392902 381 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 SRIP2-201ENST00000428470 166 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AC006994.1-201ENST00000438212 839 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AC091516.1-201ENST00000549191 703 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 HMGB2P1-201ENST00000591146 634 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 AC005034.4-201ENST00000603612 899 ntBASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC168Q8NDH2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 SRP72P2-201ENST00000344851 1979 ntBASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 SNORD3H-201ENST00000384486 214 ntBASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 MIR1251-201ENST00000408552 70 ntBASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 RNA5SP249-201ENST00000516127 99 ntBASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 AC244505.7-201ENST00000599675 272 ntBASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 AC091167.4-201ENST00000605079 184 ntBASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 AC015914.2-201ENST00000618167 288 ntBASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 AC091905.2-201ENST00000623143 306 ntBASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 AL449283.1-201ENST00000602631 3403 ntBASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 YES1-203ENST00000577961 4554 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC168Q8NDH2 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms