Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 VIS1.1-201ENST00000610517 203 ntBASIC5.13□□□□□ -1.59
KRT78Q8N1N4 AL359535.1-201ENST00000612100 1087 ntBASIC5.13□□□□□ -1.59
KRT78Q8N1N4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.13□□□□□ -1.59
KRT78Q8N1N4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KRT78Q8N1N4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRT78Q8N1N4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRT78Q8N1N4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.13□□□□□ -1.59
KRT78Q8N1N4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRT78Q8N1N4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRT78Q8N1N4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.13□□□□□ -1.59
KRT78Q8N1N4 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.13□□□□□ -1.59
KRT78Q8N1N4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AP000542.2-201ENST00000623199 6179 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 SCARNA15-201ENST00000607520 4325 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 RNA5SP435-201ENST00000364044 108 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 RNU6-1293P-201ENST00000384077 107 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 MIR105-1-201ENST00000385222 81 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 RNU1-77P-201ENST00000390868 162 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC004022.2-201ENST00000413824 193 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC234781.2-201ENST00000426370 994 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AL121776.1-201ENST00000429337 372 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 RPL36P19-201ENST00000430744 301 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC005345.1-201ENST00000431868 217 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AL389925.1-201ENST00000432257 728 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 CYCSP6-201ENST00000434498 302 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 B3GNT2P1-201ENST00000434960 952 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC090804.1-201ENST00000448870 490 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AL109741.2-201ENST00000455561 343 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC021146.8-201ENST00000507455 733 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC098976.1-201ENST00000513014 541 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 BX510359.5-201ENST00000515651 304 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC022790.1-201ENST00000522872 204 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AP005262.1-201ENST00000582646 997 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC087752.4-201ENST00000605911 462 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC122108.2-201ENST00000611946 526 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 RNU6-156P-201ENST00000621869 107 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 AC006210.2-201ENST00000367074 1545 ntBASIC5.12□□□□□ -1.59
KRT78Q8N1N4 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRT78Q8N1N4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 RNA5SP132-201ENST00000364725 118 ntBASIC5.11□□□□□ -1.59
KRT78Q8N1N4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 OR3A2-201ENST00000408891 1076 ntBASIC5.11□□□□□ -1.59
KRT78Q8N1N4 RNU2-28P-201ENST00000410457 189 ntBASIC5.11□□□□□ -1.59
KRT78Q8N1N4 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 AC079809.1-201ENST00000415468 276 ntBASIC5.11□□□□□ -1.59
KRT78Q8N1N4 RBMY2KP-201ENST00000418221 992 ntBASIC5.11□□□□□ -1.59
KRT78Q8N1N4 AC009237.2-201ENST00000421358 284 ntBASIC5.11□□□□□ -1.59
KRT78Q8N1N4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.11□□□□□ -1.59
KRT78Q8N1N4 HSPD1P12-201ENST00000429127 1069 ntBASIC5.11□□□□□ -1.59
KRT78Q8N1N4 AL161722.2-201ENST00000434731 981 ntBASIC5.11□□□□□ -1.59
KRT78Q8N1N4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms