Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 U1.25-201ENST00000614085 162 ntBASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 AC090517.2-201ENST00000614966 680 ntBASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 AC063943.3-201ENST00000615562 356 ntBASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 AP001284.1-201ENST00000528393 2118 ntBASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 AL731556.1-201ENST00000394628 3711 ntBASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.5□□□□□ -1.37
NPAS4Q8IUM7 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 MTND5P28-201ENST00000438005 1594 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 OR10R3P-201ENST00000361688 942 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 RNU6-809P-201ENST00000384461 107 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 EIF5P1-201ENST00000400019 1231 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 RPL31P52-201ENST00000407532 367 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AL513174.1-201ENST00000423182 629 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AL596266.1-201ENST00000448132 400 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 MTND5P20-201ENST00000448677 143 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AL590365.1-201ENST00000450788 243 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AC003071.1-201ENST00000451219 789 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AC098824.1-201ENST00000453565 980 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 APOOP2-201ENST00000461561 539 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AC004924.1-201ENST00000480160 781 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AC008638.1-201ENST00000506035 866 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 OR5M7P-201ENST00000526140 972 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 OR5AP1P-201ENST00000529730 940 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 VN1R79P-201ENST00000593540 513 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 BBIP1P1-201ENST00000602999 279 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AC104695.2-201ENST00000605056 775 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AC008945.2-201ENST00000606056 604 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 MIR6864-201ENST00000617935 70 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AC126177.8-201ENST00000618339 1015 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AL356321.1-201ENST00000621360 228 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AC099654.14-201ENST00000638599 341 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 MAPK10-323ENST00000641493 3207 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 NCOA4P3-201ENST00000513203 1877 ntBASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS4Q8IUM7 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AC011369.2-201ENST00000624423 1567 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 OR11H4-201ENST00000315409 1082 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms