Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 AC133555.2-201ENST00000550213 292 ntBASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 AC023824.3-201ENST00000569003 562 ntBASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 AP000919.1-202ENST00000581139 1264 ntBASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 AL391358.1-201ENST00000605342 190 ntBASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 AC026979.4-201ENST00000606555 645 ntBASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 FAM27B-201ENST00000610601 213 ntBASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 AC090510.2-201ENST00000617465 629 ntBASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 AL136964.1-201ENST00000622038 2990 ntBASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NHLRC1Q6VVB1 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 GCNT6-201ENST00000379591 934 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 U6.112-201ENST00000384129 70 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 RNU6-932P-201ENST00000391108 106 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AL078604.1-201ENST00000404609 466 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC115285.1-201ENST00000424879 736 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 ELOCP6-201ENST00000429066 328 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 NRBF2P3-201ENST00000432731 865 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AL772161.1-201ENST00000439130 476 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC004865.1-201ENST00000442276 1003 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 RPL36AP15-201ENST00000444514 266 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC104651.2-201ENST00000447549 528 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 HIGD1AP8-201ENST00000453927 274 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 RPL7P32-201ENST00000457119 744 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 ELOCP12-201ENST00000458706 328 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC092902.1-201ENST00000486999 259 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 IGLV2-34-201ENST00000490007 283 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 RPS4XP18-201ENST00000495480 763 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC231760.1-201ENST00000498002 260 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AP003355.1-201ENST00000518956 587 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 CENPUP2-201ENST00000555897 1186 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 CYP2C60P-201ENST00000566088 139 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC209154.1-201ENST00000582156 337 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 MIR4737-201ENST00000583979 81 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC006116.7-201ENST00000590141 756 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 DNAJC19P3-201ENST00000594491 331 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC092574.1-201ENST00000609771 420 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC005086.4-201ENST00000623065 213 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC020978.9-201ENST00000624380 1141 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC009452.1-201ENST00000640823 606 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AL445487.1-201ENST00000415694 1580 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AC092435.4-201ENST00000623012 4159 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 AL359922.3-201ENST00000624779 1670 ntBASIC4.22□□□□□ -1.73
NHLRC1Q6VVB1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
NHLRC1Q6VVB1 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
NHLRC1Q6VVB1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.21□□□□□ -1.74
NHLRC1Q6VVB1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms