Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 LINC01109-201ENST00000603837 3081 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC38Q502W7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC38Q502W7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC38Q502W7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC38Q502W7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC38Q502W7 AC016716.1-201ENST00000265882 708 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 RN7SKP113-201ENST00000363891 295 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 DUTP5-201ENST00000406790 469 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 MIR1182-201ENST00000408363 97 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC38Q502W7 NANOGP2-201ENST00000435391 727 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 AC073052.1-201ENST00000440417 714 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 GYG1P1-201ENST00000460864 698 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 RPL7P39-201ENST00000481157 744 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 AC090686.1-201ENST00000481577 749 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 AC048346.1-201ENST00000510247 144 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 RNU6-488P-201ENST00000515918 99 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 SNORD116-26-201ENST00000516006 96 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 RNA5SP249-201ENST00000516127 99 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC38Q502W7 OR4C2P-201ENST00000530855 1064 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC38Q502W7 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC38Q502W7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 AC084757.1-201ENST00000559987 490 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 MTND3P13-201ENST00000574391 343 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 MIR4489-201ENST00000578869 62 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC38Q502W7 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 IMMP1LP3-201ENST00000604197 224 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 AC021749.1-201ENST00000604322 607 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 AL445423.1-201ENST00000609941 536 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 AL512624.1-201ENST00000613638 469 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC38Q502W7 LINC00901.1-201ENST00000617252 152 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 AC090527.3-201ENST00000619041 548 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 AC090897.3-201ENST00000636973 1157 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 SCARNA15-201ENST00000607520 4325 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 MTND4P10-201ENST00000446199 1363 ntBASIC5.16□□□□□ -1.58
CCDC38Q502W7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC38Q502W7 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC38Q502W7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC38Q502W7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CCDC38Q502W7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC38Q502W7 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC38Q502W7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC38Q502W7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC38Q502W7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.15□□□□□ -1.58
CCDC38Q502W7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
CCDC38Q502W7 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.15□□□□□ -1.58
CCDC38Q502W7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC38Q502W7 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC38Q502W7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 RNA5SP391-201ENST00000363456 119 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 RNA5SP28-201ENST00000363841 119 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 SNORA40.2-201ENST00000390847 128 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 LAP3P1-201ENST00000403648 294 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 AL391361.1-201ENST00000405580 489 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 RN7SKP126-201ENST00000411143 300 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 AP000534.2-201ENST00000412729 568 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC38Q502W7 HMGB1P16-201ENST00000447155 540 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 RPL7P59-201ENST00000447700 943 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 OTX2P1-201ENST00000450956 354 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC38Q502W7 RN7SL443P-201ENST00000464331 290 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 OR2AO1P-201ENST00000476497 403 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 DYNLL1P6-201ENST00000503440 264 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 AC021146.3-201ENST00000511911 260 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 ENPP7P9-201ENST00000514456 627 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms