Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC004825.1-201ENST00000555068 586 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN1BQ07699 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.27□□□□□ -1.73
SCN1BQ07699 AC023825.1-201ENST00000566704 1030 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 MTCYBP28-201ENST00000566728 1132 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 AC010735.1-201ENST00000567305 1026 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.27□□□□□ -1.73
SCN1BQ07699 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.27□□□□□ -1.73
SCN1BQ07699 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCN1BQ07699 YWHAQP7-201ENST00000603536 658 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 AC104687.2-201ENST00000604442 342 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 AC016542.1-201ENST00000608259 493 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 AC022079.2-201ENST00000619739 566 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 AC012414.7-202ENST00000622705 1090 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.27□□□□□ -1.73
SCN1BQ07699 AC006927.2-201ENST00000639256 389 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SCN1BQ07699 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN1BQ07699 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN1BQ07699 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN1BQ07699 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN1BQ07699 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SCN1BQ07699 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCN1BQ07699 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SCN1BQ07699 DCAF13P1-201ENST00000495256 1330 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCN1BQ07699 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SCN1BQ07699 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.26□□□□□ -1.73
SCN1BQ07699 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCN1BQ07699 RN7SKP162-201ENST00000363605 345 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 AC234772.1-201ENST00000377927 937 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 RNU6-444P-201ENST00000383988 108 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 RN7SKP114-201ENST00000410327 279 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.26□□□□□ -1.73
SCN1BQ07699 OR51A3P-201ENST00000413596 924 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 ATG4AP1-201ENST00000416893 538 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.26□□□□□ -1.73
SCN1BQ07699 RPL12P11-201ENST00000439970 501 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.26□□□□□ -1.73
SCN1BQ07699 FGF7P3-201ENST00000454645 303 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 AC012170.1-201ENST00000495139 359 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.26□□□□□ -1.73
SCN1BQ07699 AC025445.1-201ENST00000502728 300 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 AC093801.2-201ENST00000503966 1050 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 AC010350.1-201ENST00000504908 231 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 OR51K1P-201ENST00000510214 950 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.26□□□□□ -1.73
SCN1BQ07699 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.26□□□□□ -1.73
SCN1BQ07699 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.26□□□□□ -1.73
SCN1BQ07699 AC100770.1-201ENST00000532310 322 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.26□□□□□ -1.73
SCN1BQ07699 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.26□□□□□ -1.73
SCN1BQ07699 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.26□□□□□ -1.73
SCN1BQ07699 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.26□□□□□ -1.73
SCN1BQ07699 AC005255.1-201ENST00000593748 216 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 AC008115.4-201ENST00000619780 775 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 MIR4496-201ENST00000635896 61 ntBASIC4.26□□□□□ -1.73
SCN1BQ07699 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCN1BQ07699 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCN1BQ07699 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.26□□□□□ -1.73
SCN1BQ07699 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.26□□□□□ -1.73
SCN1BQ07699 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCN1BQ07699 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCN1BQ07699 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.25□□□□□ -1.73
SCN1BQ07699 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
SCN1BQ07699 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
SCN1BQ07699 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCN1BQ07699 RNU6-1243P-201ENST00000364028 107 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCN1BQ07699 MIR16-1-201ENST00000385271 89 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 U3.25-201ENST00000391209 220 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCN1BQ07699 SFR1P1-201ENST00000403720 688 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 RN7SKP177-201ENST00000410567 355 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 AC008280.1-201ENST00000418851 412 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 AC004552.1-201ENST00000419089 348 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SCN1BQ07699 FTH1P6-201ENST00000430768 320 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.25□□□□□ -1.73
SCN1BQ07699 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.25□□□□□ -1.73
SCN1BQ07699 MTND5P28-201ENST00000438005 1594 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.25□□□□□ -1.73
SCN1BQ07699 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.25□□□□□ -1.73
SCN1BQ07699 Z77249.1-201ENST00000444622 1175 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 PPIAP3-201ENST00000450588 505 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.25□□□□□ -1.73
SCN1BQ07699 AL645939.1-201ENST00000453429 797 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 ATP5G1P3-201ENST00000463301 410 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 RPS26P3-201ENST00000470205 348 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 AC087879.1-201ENST00000474343 374 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.25□□□□□ -1.73
SCN1BQ07699 S100A11P1-201ENST00000477525 312 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 AC090543.2-201ENST00000483963 348 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 AC004057.1-201ENST00000485827 348 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCN1BQ07699 AC091860.1-201ENST00000505723 432 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 SNX5P1-201ENST00000505757 1041 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.25□□□□□ -1.73
SCN1BQ07699 PPBPP1-201ENST00000510807 373 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms