Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.54□□□□□ -1.84
AP3S2P59780 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.54□□□□□ -1.84
AP3S2P59780 AL162591.2-201ENST00000449634 317 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.54□□□□□ -1.84
AP3S2P59780 AC053481.1-201ENST00000467217 306 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 RPL21P103-201ENST00000479921 488 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.54□□□□□ -1.84
AP3S2P59780 HIGD1AP14-201ENST00000507617 282 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 AC021146.1-201ENST00000511202 716 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 AC026726.1-201ENST00000512859 601 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 RN7SKP70-201ENST00000516655 271 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.54□□□□□ -1.84
AP3S2P59780 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.54□□□□□ -1.84
AP3S2P59780 AC008033.2-201ENST00000542626 177 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.54□□□□□ -1.84
AP3S2P59780 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.54□□□□□ -1.84
AP3S2P59780 AC020978.7-201ENST00000575953 1187 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 MIR3667-201ENST00000581025 74 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.54□□□□□ -1.84
AP3S2P59780 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.54□□□□□ -1.84
AP3S2P59780 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.54□□□□□ -1.84
AP3S2P59780 AC098935.2-201ENST00000604222 466 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 AL133243.1-201ENST00000614487 366 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 AL391261.4-201ENST00000616012 481 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 AL591424.2-201ENST00000617023 128 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 MIR6737-201ENST00000617385 70 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 AC020978.9-201ENST00000624380 1141 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 SNORA17.5-201ENST00000630429 132 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
AP3S2P59780 U6.98-201ENST00000637157 84 ntBASIC3.54□□□□□ -1.84
AP3S2P59780 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
AP3S2P59780 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
AP3S2P59780 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
AP3S2P59780 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
AP3S2P59780 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
AP3S2P59780 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP3S2P59780 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.53□□□□□ -1.84
AP3S2P59780 AC119744.1-201ENST00000454746 1715 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 RAD17P1-201ENST00000418130 2042 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP3S2P59780 AC109780.1-201ENST00000451768 1344 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.53□□□□□ -1.84
AP3S2P59780 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
AP3S2P59780 Z98941.1-201ENST00000407764 100 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 SNRPFP1-201ENST00000414761 252 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 AC006065.1-201ENST00000422539 802 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.53□□□□□ -1.84
AP3S2P59780 KCTD9P3-201ENST00000434597 1169 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 RPL23AP46-201ENST00000438548 490 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 AL512326.1-201ENST00000443050 721 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 CCRL1P1-201ENST00000449542 1053 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 AL136097.1-201ENST00000456945 913 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 RPL7L1P8-201ENST00000469911 741 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.53□□□□□ -1.84
AP3S2P59780 RN7SL649P-201ENST00000496974 275 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.53□□□□□ -1.84
AP3S2P59780 MTATP6P1-201ENST00000514057 681 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.53□□□□□ -1.84
AP3S2P59780 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.53□□□□□ -1.84
AP3S2P59780 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.53□□□□□ -1.84
AP3S2P59780 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.53□□□□□ -1.84
AP3S2P59780 AC005363.1-201ENST00000530779 351 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 MTND5P21-201ENST00000531961 522 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 AP004242.1-201ENST00000533701 349 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 HAUS8P1-201ENST00000549005 542 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 OR4U1P-201ENST00000554958 912 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 LLPHP1-201ENST00000603571 367 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 AL355816.1-201ENST00000607951 118 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 AL391834.1-201ENST00000609609 560 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 MIR4278-201ENST00000636094 69 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
AP3S2P59780 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.53□□□□□ -1.84
AP3S2P59780 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP3S2P59780 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
AP3S2P59780 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP3S2P59780 AP001148.1-201ENST00000624124 2359 ntBASIC3.53□□□□□ -1.84
AP3S2P59780 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.85
AP3S2P59780 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
AP3S2P59780 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
AP3S2P59780 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
AP3S2P59780 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
AP3S2P59780 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
AP3S2P59780 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.52□□□□□ -1.85
AP3S2P59780 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
AP3S2P59780 PABPC1P6-201ENST00000445594 1829 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
AP3S2P59780 AL590240.1-201ENST00000334118 313 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 RNA5SP242-201ENST00000364171 118 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.52□□□□□ -1.85
AP3S2P59780 USP9YP31-201ENST00000431405 881 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 MTCYBP29-201ENST00000436327 1006 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 CNOT7P2-201ENST00000441051 832 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.52□□□□□ -1.85
AP3S2P59780 AC073850.1-201ENST00000449243 255 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 snoU13.20-201ENST00000459180 104 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 RNU7-27P-201ENST00000459281 62 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.52□□□□□ -1.85
AP3S2P59780 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms