Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.7□□□□□ -1.5
RHBDL3P58872 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RHBDL3P58872 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDL3P58872 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDL3P58872 AC138393.1-206ENST00000540997 1886 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 AL592182.3-201ENST00000642132 3304 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RHBDL3P58872 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDL3P58872 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.7□□□□□ -1.5
RHBDL3P58872 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDL3P58872 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDL3P58872 AC000123.3-201ENST00000624029 4975 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RHBDL3P58872 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RHBDL3P58872 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.69□□□□□ -1.5
RHBDL3P58872 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
RHBDL3P58872 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RHBDL3P58872 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RHBDL3P58872 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RHBDL3P58872 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RHBDL3P58872 MIR129-1-201ENST00000384972 72 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RHBDL3P58872 RNU1-82P-201ENST00000390851 165 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RHBDL3P58872 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.69□□□□□ -1.5
RHBDL3P58872 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.69□□□□□ -1.5
RHBDL3P58872 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.69□□□□□ -1.5
RHBDL3P58872 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.69□□□□□ -1.5
RHBDL3P58872 RPEP3-201ENST00000425462 676 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.69□□□□□ -1.5
RHBDL3P58872 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.69□□□□□ -1.5
RHBDL3P58872 PTGES3P1-201ENST00000439531 483 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 AC012512.1-201ENST00000446594 718 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 AC108463.1-201ENST00000450258 347 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 RHEBP2-201ENST00000450289 600 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 RPL5P30-201ENST00000465511 891 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.69□□□□□ -1.5
RHBDL3P58872 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.69□□□□□ -1.5
RHBDL3P58872 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.69□□□□□ -1.5
RHBDL3P58872 OR5H4P-201ENST00000510851 923 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 RNU1-6P-201ENST00000516290 144 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.69□□□□□ -1.5
RHBDL3P58872 NDUFS5P6-201ENST00000529136 295 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.69□□□□□ -1.5
RHBDL3P58872 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.69□□□□□ -1.5
RHBDL3P58872 AC087897.1-201ENST00000550134 156 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.69□□□□□ -1.5
RHBDL3P58872 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.69□□□□□ -1.5
RHBDL3P58872 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.69□□□□□ -1.5
RHBDL3P58872 RPL26P30-202ENST00000602923 645 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 RPAP2P1-201ENST00000603626 1168 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 AC005191.1-201ENST00000603950 358 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.69□□□□□ -1.5
RHBDL3P58872 AC073387.2-201ENST00000604797 784 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 AC024933.1-201ENST00000608472 348 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.69□□□□□ -1.5
RHBDL3P58872 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.69□□□□□ -1.5
RHBDL3P58872 AC099654.9-201ENST00000637055 678 ntBASIC5.69□□□□□ -1.5
RHBDL3P58872 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RHBDL3P58872 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RHBDL3P58872 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.69□□□□□ -1.5
RHBDL3P58872 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RHBDL3P58872 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RHBDL3P58872 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDL3P58872 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDL3P58872 AL139811.1-201ENST00000424779 2299 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 Z73965.1-201ENST00000623412 2297 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 ERCC6-202ENST00000374127 1782 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDL3P58872 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RHBDL3P58872 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDL3P58872 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RHBDL3P58872 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.68□□□□□ -1.5
RHBDL3P58872 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.68□□□□□ -1.5
RHBDL3P58872 CENPIP1-201ENST00000425713 902 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 AC091390.1-201ENST00000433904 331 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.68□□□□□ -1.5
RHBDL3P58872 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.68□□□□□ -1.5
RHBDL3P58872 AC244505.3-201ENST00000454598 187 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 AL356981.1-201ENST00000454879 684 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 RPL21P71-201ENST00000465598 459 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.68□□□□□ -1.5
RHBDL3P58872 MTATP6P22-201ENST00000507369 598 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.68□□□□□ -1.5
RHBDL3P58872 HPRT1P1-201ENST00000509498 657 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 SOD1P3-201ENST00000518682 454 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDL3P58872 OR8I1P-201ENST00000529291 931 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.68□□□□□ -1.5
RHBDL3P58872 AL161713.1-201ENST00000555538 145 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.68□□□□□ -1.5
RHBDL3P58872 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.68□□□□□ -1.5
RHBDL3P58872 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.68□□□□□ -1.5
RHBDL3P58872 AC022069.1-201ENST00000582910 658 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.68□□□□□ -1.5
RHBDL3P58872 AC006213.4-201ENST00000616184 634 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.68□□□□□ -1.5
RHBDL3P58872 AC012414.7-202ENST00000622705 1090 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 AP000843.1-201ENST00000624880 701 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms