Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC009963.2-201ENST00000453431 138 ntBASIC3.89□□□□□ -1.79
CLDN18P56856 UQCRHP4-201ENST00000471686 272 ntBASIC3.89□□□□□ -1.79
CLDN18P56856 RN7SL691P-201ENST00000494487 301 ntBASIC3.89□□□□□ -1.79
CLDN18P56856 RPS6P4-201ENST00000494693 758 ntBASIC3.89□□□□□ -1.79
CLDN18P56856 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN18P56856 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN18P56856 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN18P56856 AC008958.1-201ENST00000511047 682 ntBASIC3.89□□□□□ -1.79
CLDN18P56856 HMGB1P47-201ENST00000511281 589 ntBASIC3.89□□□□□ -1.79
CLDN18P56856 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.89□□□□□ -1.79
CLDN18P56856 CYCSP29-201ENST00000533731 318 ntBASIC3.89□□□□□ -1.79
CLDN18P56856 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN18P56856 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN18P56856 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.89□□□□□ -1.79
CLDN18P56856 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.89□□□□□ -1.79
CLDN18P56856 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.89□□□□□ -1.79
CLDN18P56856 AL139286.1-201ENST00000604465 483 ntBASIC3.89□□□□□ -1.79
CLDN18P56856 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN18P56856 AC012557.1-201ENST00000607115 611 ntBASIC3.89□□□□□ -1.79
CLDN18P56856 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN18P56856 AC078899.5-201ENST00000612475 178 ntBASIC3.89□□□□□ -1.79
CLDN18P56856 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN18P56856 AC140113.4-201ENST00000622087 222 ntBASIC3.89□□□□□ -1.79
CLDN18P56856 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN18P56856 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN18P56856 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN18P56856 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CLDN18P56856 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN18P56856 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN18P56856 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN18P56856 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN18P56856 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CLDN18P56856 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN18P56856 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN18P56856 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN18P56856 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CLDN18P56856 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.88□□□□□ -1.79
CLDN18P56856 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN18P56856 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.88□□□□□ -1.79
CLDN18P56856 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CLDN18P56856 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CLDN18P56856 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN18P56856 MIR421-201ENST00000365696 85 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
CLDN18P56856 RNU6-317P-201ENST00000384031 107 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 RN7SKP167-201ENST00000411047 285 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN18P56856 MFSD13B-201ENST00000420133 1290 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 AL157831.1-201ENST00000426134 473 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 EIF2S2P3-201ENST00000428356 999 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 FTH1P6-201ENST00000430768 320 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN18P56856 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CLDN18P56856 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN18P56856 AL512326.1-201ENST00000443050 721 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 TPMTP4-201ENST00000450749 678 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN18P56856 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
CLDN18P56856 AC105137.1-201ENST00000484355 562 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 AC090013.1-201ENST00000485147 480 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 AC010374.1-201ENST00000503762 1237 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.88□□□□□ -1.79
CLDN18P56856 AC108475.1-201ENST00000507880 950 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 PARP4P3-201ENST00000510265 317 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 AC108043.1-201ENST00000512696 574 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 AC090151.1-201ENST00000520784 730 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 AP003730.1-201ENST00000524605 285 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.88□□□□□ -1.79
CLDN18P56856 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN18P56856 AL352979.3-201ENST00000553515 247 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 MIR548Y-201ENST00000582739 110 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN18P56856 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN18P56856 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN18P56856 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.88□□□□□ -1.79
CLDN18P56856 AL731566.2-201ENST00000618971 317 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 AC007546.1-201ENST00000619452 559 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 AP003072.4-201ENST00000624580 310 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.88□□□□□ -1.79
CLDN18P56856 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN18P56856 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN18P56856 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.88□□□□□ -1.79
CLDN18P56856 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN18P56856 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN18P56856 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN18P56856 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN18P56856 AC022893.2-201ENST00000564832 3296 ntBASIC3.88□□□□□ -1.79
CLDN18P56856 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CLDN18P56856 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN18P56856 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
CLDN18P56856 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN18P56856 AC134882.1-201ENST00000603738 1676 ntBASIC3.87□□□□□ -1.79
CLDN18P56856 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.87□□□□□ -1.79
CLDN18P56856 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLDN18P56856 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.87□□□□□ -1.79
CLDN18P56856 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.87□□□□□ -1.79
CLDN18P56856 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CLDN18P56856 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLDN18P56856 MIR383-201ENST00000362257 73 ntBASIC3.87□□□□□ -1.79
CLDN18P56856 U3.15-201ENST00000365398 212 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms