Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 HCFC2P1-201ENST00000392864 1592 ntBASIC5.48□□□□□ -1.53
CLTCL1P53675 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLTCL1P53675 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLTCL1P53675 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CLTCL1P53675 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLTCL1P53675 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CLTCL1P53675 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLTCL1P53675 AL139039.2-201ENST00000407436 479 ntBASIC5.48□□□□□ -1.53
CLTCL1P53675 RPL21P11-201ENST00000461458 483 ntBASIC5.48□□□□□ -1.53
CLTCL1P53675 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.48□□□□□ -1.53
CLTCL1P53675 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.48□□□□□ -1.53
CLTCL1P53675 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.48□□□□□ -1.53
CLTCL1P53675 AC007458.1-201ENST00000542812 373 ntBASIC5.48□□□□□ -1.53
CLTCL1P53675 CYP4A43P-201ENST00000568156 121 ntBASIC5.48□□□□□ -1.53
CLTCL1P53675 AC020914.6-201ENST00000594327 272 ntBASIC5.48□□□□□ -1.53
CLTCL1P53675 AL591424.2-201ENST00000617023 128 ntBASIC5.48□□□□□ -1.53
CLTCL1P53675 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.48□□□□□ -1.53
CLTCL1P53675 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLTCL1P53675 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CLTCL1P53675 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLTCL1P53675 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLTCL1P53675 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
CLTCL1P53675 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CLTCL1P53675 ZNF602P-201ENST00000405929 924 ntBASIC5.47□□□□□ -1.53
CLTCL1P53675 CYCSP4-201ENST00000429682 331 ntBASIC5.47□□□□□ -1.53
CLTCL1P53675 HSPD1P21-201ENST00000436541 245 ntBASIC5.47□□□□□ -1.53
CLTCL1P53675 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.47□□□□□ -1.53
CLTCL1P53675 AC006511.1-201ENST00000470614 315 ntBASIC5.47□□□□□ -1.53
CLTCL1P53675 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.47□□□□□ -1.53
CLTCL1P53675 SNORA70.18-201ENST00000516696 98 ntBASIC5.47□□□□□ -1.53
CLTCL1P53675 OR8I1P-201ENST00000529291 931 ntBASIC5.47□□□□□ -1.53
CLTCL1P53675 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.47□□□□□ -1.53
CLTCL1P53675 SNORA62.6-201ENST00000606322 83 ntBASIC5.47□□□□□ -1.53
CLTCL1P53675 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.47□□□□□ -1.53
CLTCL1P53675 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLTCL1P53675 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CLTCL1P53675 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.46□□□□□ -1.54
CLTCL1P53675 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.46□□□□□ -1.54
CLTCL1P53675 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.46□□□□□ -1.54
CLTCL1P53675 PTMAP5-201ENST00000393073 333 ntBASIC5.46□□□□□ -1.54
CLTCL1P53675 PRDX3P3-201ENST00000447765 522 ntBASIC5.46□□□□□ -1.54
CLTCL1P53675 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.46□□□□□ -1.54
CLTCL1P53675 RPL23AP12-201ENST00000467573 473 ntBASIC5.46□□□□□ -1.54
CLTCL1P53675 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.46□□□□□ -1.54
CLTCL1P53675 RN7SL585P-201ENST00000470538 280 ntBASIC5.46□□□□□ -1.54
CLTCL1P53675 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.46□□□□□ -1.54
CLTCL1P53675 OR7E13P-201ENST00000526052 910 ntBASIC5.46□□□□□ -1.54
CLTCL1P53675 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.46□□□□□ -1.54
CLTCL1P53675 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.46□□□□□ -1.54
CLTCL1P53675 BNIP3P11-201ENST00000603878 563 ntBASIC5.46□□□□□ -1.54
CLTCL1P53675 AL160281.1-201ENST00000605307 311 ntBASIC5.46□□□□□ -1.54
CLTCL1P53675 AL354760.1-201ENST00000608357 643 ntBASIC5.46□□□□□ -1.54
CLTCL1P53675 AP000255.1-201ENST00000610276 676 ntBASIC5.46□□□□□ -1.54
CLTCL1P53675 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLTCL1P53675 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLTCL1P53675 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLTCL1P53675 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CLTCL1P53675 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
CLTCL1P53675 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLTCL1P53675 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLTCL1P53675 RNU1-108P-201ENST00000362556 161 ntBASIC5.45□□□□□ -1.54
CLTCL1P53675 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLTCL1P53675 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLTCL1P53675 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.45□□□□□ -1.54
CLTCL1P53675 SETP9-201ENST00000423837 832 ntBASIC5.45□□□□□ -1.54
CLTCL1P53675 AC091390.3-201ENST00000426478 338 ntBASIC5.45□□□□□ -1.54
CLTCL1P53675 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.45□□□□□ -1.54
CLTCL1P53675 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.45□□□□□ -1.54
CLTCL1P53675 PLGLA-201ENST00000465668 449 ntBASIC5.45□□□□□ -1.54
CLTCL1P53675 RN7SL293P-201ENST00000481765 281 ntBASIC5.45□□□□□ -1.54
CLTCL1P53675 SETP1-201ENST00000556014 845 ntBASIC5.45□□□□□ -1.54
CLTCL1P53675 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.45□□□□□ -1.54
CLTCL1P53675 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.45□□□□□ -1.54
CLTCL1P53675 AC120036.2-201ENST00000509729 1474 ntBASIC5.45□□□□□ -1.54
CLTCL1P53675 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLTCL1P53675 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLTCL1P53675 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.45□□□□□ -1.54
CLTCL1P53675 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLTCL1P53675 AC007823.1-201ENST00000569932 1566 ntBASIC5.45□□□□□ -1.54
CLTCL1P53675 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.45□□□□□ -1.54
CLTCL1P53675 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CLTCL1P53675 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLTCL1P53675 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.45□□□□□ -1.54
CLTCL1P53675 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.45□□□□□ -1.54
CLTCL1P53675 GSTM3P2-201ENST00000412746 530 ntBASIC5.45□□□□□ -1.54
CLTCL1P53675 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLTCL1P53675 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.45□□□□□ -1.54
CLTCL1P53675 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.45□□□□□ -1.54
CLTCL1P53675 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.45□□□□□ -1.54
CLTCL1P53675 RPS4XP10-201ENST00000465034 731 ntBASIC5.45□□□□□ -1.54
CLTCL1P53675 RN7SL271P-201ENST00000487601 295 ntBASIC5.45□□□□□ -1.54
CLTCL1P53675 UBTFL9-201ENST00000534504 1148 ntBASIC5.45□□□□□ -1.54
CLTCL1P53675 AC008011.1-201ENST00000545989 227 ntBASIC5.45□□□□□ -1.54
CLTCL1P53675 AL121834.1-201ENST00000572284 509 ntBASIC5.45□□□□□ -1.54
CLTCL1P53675 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
CLTCL1P53675 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLTCL1P53675 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
CLTCL1P53675 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLTCL1P53675 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLTCL1P53675 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms