Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.31□□□□□ -1.56
NEK3P51956 AC009127.1-201ENST00000467090 155 ntBASIC5.31□□□□□ -1.56
NEK3P51956 RPS3AP6-201ENST00000484430 795 ntBASIC5.31□□□□□ -1.56
NEK3P51956 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.31□□□□□ -1.56
NEK3P51956 AC005412.2-201ENST00000492004 341 ntBASIC5.31□□□□□ -1.56
NEK3P51956 MTND4LP2-201ENST00000502312 285 ntBASIC5.31□□□□□ -1.56
NEK3P51956 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.31□□□□□ -1.56
NEK3P51956 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.31□□□□□ -1.56
NEK3P51956 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.31□□□□□ -1.56
NEK3P51956 RN7SKP287-201ENST00000516546 266 ntBASIC5.31□□□□□ -1.56
NEK3P51956 AP001189.2-201ENST00000527320 189 ntBASIC5.31□□□□□ -1.56
NEK3P51956 MTCO2P15-201ENST00000532655 656 ntBASIC5.31□□□□□ -1.56
NEK3P51956 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.31□□□□□ -1.56
NEK3P51956 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.31□□□□□ -1.56
NEK3P51956 AC124068.1-201ENST00000563131 678 ntBASIC5.31□□□□□ -1.56
NEK3P51956 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.31□□□□□ -1.56
NEK3P51956 AC006116.3-201ENST00000592968 361 ntBASIC5.31□□□□□ -1.56
NEK3P51956 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.31□□□□□ -1.56
NEK3P51956 AC011626.1-201ENST00000604710 562 ntBASIC5.31□□□□□ -1.56
NEK3P51956 AC093424.1-201ENST00000604999 338 ntBASIC5.31□□□□□ -1.56
NEK3P51956 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.31□□□□□ -1.56
NEK3P51956 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
NEK3P51956 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
NEK3P51956 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.31□□□□□ -1.56
NEK3P51956 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 AL672167.1-204ENST00000641875 3017 ntBASIC5.31□□□□□ -1.56
NEK3P51956 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.31□□□□□ -1.56
NEK3P51956 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEK3P51956 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.3□□□□□ -1.56
NEK3P51956 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NEK3P51956 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NEK3P51956 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
NEK3P51956 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NEK3P51956 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.3□□□□□ -1.56
NEK3P51956 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEK3P51956 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEK3P51956 DCAF13P3-201ENST00000561147 1334 ntBASIC5.3□□□□□ -1.56
NEK3P51956 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.3□□□□□ -1.56
NEK3P51956 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEK3P51956 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NEK3P51956 AC023421.1-201ENST00000590535 1785 ntBASIC5.3□□□□□ -1.56
NEK3P51956 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEK3P51956 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
NEK3P51956 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEK3P51956 RNU6-251P-201ENST00000363235 104 ntBASIC5.3□□□□□ -1.56
NEK3P51956 RN7SKP153-201ENST00000365026 316 ntBASIC5.3□□□□□ -1.56
NEK3P51956 UBBP2-201ENST00000376781 231 ntBASIC5.3□□□□□ -1.56
NEK3P51956 RNU1-106P-201ENST00000384382 164 ntBASIC5.3□□□□□ -1.56
NEK3P51956 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.3□□□□□ -1.56
NEK3P51956 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.3□□□□□ -1.56
NEK3P51956 NPM1P34-201ENST00000428821 893 ntBASIC5.3□□□□□ -1.56
NEK3P51956 RPL34P6-201ENST00000432390 345 ntBASIC5.3□□□□□ -1.56
NEK3P51956 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.3□□□□□ -1.56
NEK3P51956 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.3□□□□□ -1.56
NEK3P51956 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.3□□□□□ -1.56
NEK3P51956 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NEK3P51956 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.3□□□□□ -1.56
NEK3P51956 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.3□□□□□ -1.56
NEK3P51956 CEACAMP7-201ENST00000444105 496 ntBASIC5.3□□□□□ -1.56
NEK3P51956 AL645937.3-201ENST00000453647 936 ntBASIC5.3□□□□□ -1.56
NEK3P51956 RFC5P1-201ENST00000454419 874 ntBASIC5.3□□□□□ -1.56
NEK3P51956 RPS3AP53-201ENST00000454716 778 ntBASIC5.3□□□□□ -1.56
NEK3P51956 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.3□□□□□ -1.56
NEK3P51956 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.3□□□□□ -1.56
NEK3P51956 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.3□□□□□ -1.56
NEK3P51956 RN7SL329P-201ENST00000467740 299 ntBASIC5.3□□□□□ -1.56
NEK3P51956 RPL7AP6-201ENST00000477943 801 ntBASIC5.3□□□□□ -1.56
NEK3P51956 AC022133.1-201ENST00000490961 571 ntBASIC5.3□□□□□ -1.56
NEK3P51956 AC109462.1-201ENST00000491087 368 ntBASIC5.3□□□□□ -1.56
NEK3P51956 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.3□□□□□ -1.56
NEK3P51956 AC090071.1-201ENST00000507713 644 ntBASIC5.3□□□□□ -1.56
NEK3P51956 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.3□□□□□ -1.56
NEK3P51956 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NEK3P51956 AC012400.1-201ENST00000518452 381 ntBASIC5.3□□□□□ -1.56
NEK3P51956 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.3□□□□□ -1.56
NEK3P51956 OR5AN2P-201ENST00000534535 896 ntBASIC5.3□□□□□ -1.56
NEK3P51956 AP000619.3-201ENST00000535634 1127 ntBASIC5.3□□□□□ -1.56
NEK3P51956 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.3□□□□□ -1.56
NEK3P51956 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.3□□□□□ -1.56
NEK3P51956 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.3□□□□□ -1.56
NEK3P51956 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.3□□□□□ -1.56
NEK3P51956 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.3□□□□□ -1.56
NEK3P51956 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.3□□□□□ -1.56
NEK3P51956 MTND3P19-201ENST00000603825 345 ntBASIC5.3□□□□□ -1.56
NEK3P51956 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.3□□□□□ -1.56
NEK3P51956 AC013470.4-201ENST00000619978 986 ntBASIC5.3□□□□□ -1.56
NEK3P51956 AC068870.2-201ENST00000620635 389 ntBASIC5.3□□□□□ -1.56
NEK3P51956 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEK3P51956 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NEK3P51956 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEK3P51956 AP001642.1-201ENST00000624727 2117 ntBASIC5.3□□□□□ -1.56
NEK3P51956 AL022393.1-201ENST00000625142 1677 ntBASIC5.3□□□□□ -1.56
NEK3P51956 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms