Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 OR5BE1P-201ENST00000425977 939 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 MTND4LP14-201ENST00000429447 288 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.8□□□□□ -1.64
NEDD4P46934 ELOCP8-201ENST00000439309 332 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 ELOCP15-201ENST00000442090 332 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.8□□□□□ -1.64
NEDD4P46934 AC006326.1-201ENST00000445465 787 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 RPS11P1-201ENST00000451072 473 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 RPL38P1-201ENST00000460914 211 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 AC104629.2-201ENST00000468627 598 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 RN7SL585P-201ENST00000470538 280 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.8□□□□□ -1.64
NEDD4P46934 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.8□□□□□ -1.64
NEDD4P46934 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.8□□□□□ -1.64
NEDD4P46934 AC110743.1-201ENST00000584870 478 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.8□□□□□ -1.64
NEDD4P46934 MIMT1-201ENST00000597105 1050 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.8□□□□□ -1.64
NEDD4P46934 AL451044.1-201ENST00000604867 238 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 AC090948.2-201ENST00000607363 564 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 MIR6868-201ENST00000611215 58 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 AL133370.2-201ENST00000619934 439 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.8□□□□□ -1.64
NEDD4P46934 AP005264.7-201ENST00000625003 745 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NEDD4P46934 OR5BE1P-202ENST00000641168 1176 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD4P46934 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD4P46934 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD4P46934 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD4P46934 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD4P46934 AC011266.1-201ENST00000624119 3569 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD4P46934 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.8□□□□□ -1.64
NEDD4P46934 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
NEDD4P46934 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.8□□□□□ -1.64
NEDD4P46934 HSPD1P11-201ENST00000508643 1702 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 ZNF962P-201ENST00000443465 3140 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD4P46934 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NEDD4P46934 SNORD35B-201ENST00000363660 87 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 RPS24P12-201ENST00000402084 394 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD4P46934 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.79□□□□□ -1.64
NEDD4P46934 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.79□□□□□ -1.64
NEDD4P46934 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.79□□□□□ -1.64
NEDD4P46934 VDAC1P6-201ENST00000430062 855 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 MTND4P15-201ENST00000437913 1033 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 CCRL1P1-201ENST00000449542 1053 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.79□□□□□ -1.64
NEDD4P46934 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.79□□□□□ -1.64
NEDD4P46934 AL132838.2-201ENST00000492041 314 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.79□□□□□ -1.64
NEDD4P46934 AC139783.2-201ENST00000504847 1145 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 AC108064.1-201ENST00000513791 460 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 MYL12AP1-201ENST00000518490 515 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.79□□□□□ -1.64
NEDD4P46934 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.79□□□□□ -1.64
NEDD4P46934 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.79□□□□□ -1.64
NEDD4P46934 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.79□□□□□ -1.64
NEDD4P46934 AC068020.1-201ENST00000594215 661 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 AC016717.3-201ENST00000624730 554 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.79□□□□□ -1.64
NEDD4P46934 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.79□□□□□ -1.64
NEDD4P46934 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD4P46934 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD4P46934 MTND5P23-201ENST00000430812 1655 ntBASIC4.79□□□□□ -1.64
NEDD4P46934 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD4P46934 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NEDD4P46934 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.79□□□□□ -1.64
NEDD4P46934 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD4P46934 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD4P46934 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.79□□□□□ -1.64
NEDD4P46934 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD4P46934 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.79□□□□□ -1.64
NEDD4P46934 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD4P46934 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.78□□□□□ -1.64
NEDD4P46934 AC027228.2-201ENST00000567141 2154 ntBASIC4.78□□□□□ -1.64
NEDD4P46934 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD4P46934 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD4P46934 SETP10-201ENST00000424368 814 ntBASIC4.78□□□□□ -1.64
NEDD4P46934 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD4P46934 PTMAP3-201ENST00000447474 330 ntBASIC4.78□□□□□ -1.64
NEDD4P46934 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.78□□□□□ -1.64
NEDD4P46934 EIF2S2P4-201ENST00000461070 984 ntBASIC4.78□□□□□ -1.64
NEDD4P46934 AL161747.1-201ENST00000480068 358 ntBASIC4.78□□□□□ -1.64
NEDD4P46934 AC093267.1-201ENST00000489176 961 ntBASIC4.78□□□□□ -1.64
NEDD4P46934 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.78□□□□□ -1.64
NEDD4P46934 RNU6-467P-201ENST00000517027 110 ntBASIC4.78□□□□□ -1.64
NEDD4P46934 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.78□□□□□ -1.64
NEDD4P46934 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.78□□□□□ -1.64
NEDD4P46934 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD4P46934 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD4P46934 LINC00557-201ENST00000563184 1279 ntBASIC4.78□□□□□ -1.64
NEDD4P46934 AC007224.1-201ENST00000564410 144 ntBASIC4.78□□□□□ -1.64
NEDD4P46934 AC025627.2-201ENST00000576220 160 ntBASIC4.78□□□□□ -1.64
NEDD4P46934 MIR3160-1-201ENST00000577972 85 ntBASIC4.78□□□□□ -1.64
NEDD4P46934 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms