Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC090819.1-201ENST00000523800 1111 ntBASIC4.26□□□□□ -1.73
FDFT1P37268 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.26□□□□□ -1.73
FDFT1P37268 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.26□□□□□ -1.73
FDFT1P37268 AC110743.1-201ENST00000584870 478 ntBASIC4.26□□□□□ -1.73
FDFT1P37268 AC012603.1-201ENST00000606424 528 ntBASIC4.26□□□□□ -1.73
FDFT1P37268 uc_338.9-201ENST00000617424 182 ntBASIC4.26□□□□□ -1.73
FDFT1P37268 AL359715.5-201ENST00000623431 443 ntBASIC4.26□□□□□ -1.73
FDFT1P37268 AP003497.2-201ENST00000624220 967 ntBASIC4.26□□□□□ -1.73
FDFT1P37268 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.26□□□□□ -1.73
FDFT1P37268 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
FDFT1P37268 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FDFT1P37268 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
FDFT1P37268 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
FDFT1P37268 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.26□□□□□ -1.73
FDFT1P37268 AC007342.9-201ENST00000623877 1385 ntBASIC4.26□□□□□ -1.73
FDFT1P37268 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
FDFT1P37268 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.25□□□□□ -1.73
FDFT1P37268 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.25□□□□□ -1.73
FDFT1P37268 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FDFT1P37268 Z82217.1-201ENST00000625157 8149 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
FDFT1P37268 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FDFT1P37268 RNU6-666P-201ENST00000363499 107 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 RNA5SP447-201ENST00000363749 119 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 GSTA12P-201ENST00000402398 508 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 RPS4XP9-201ENST00000405151 780 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 ZNF603P-201ENST00000405613 487 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 RNU6-564P-201ENST00000410983 104 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 ELOCP19-201ENST00000411919 318 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.25□□□□□ -1.73
FDFT1P37268 GAPDHP49-201ENST00000421421 961 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.25□□□□□ -1.73
FDFT1P37268 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.25□□□□□ -1.73
FDFT1P37268 AC239809.1-201ENST00000450470 217 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 RNU7-27P-201ENST00000459281 62 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.25□□□□□ -1.73
FDFT1P37268 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.25□□□□□ -1.73
FDFT1P37268 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
FDFT1P37268 AC008958.1-201ENST00000511047 682 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 NDUFB4P12-201ENST00000513465 390 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.25□□□□□ -1.73
FDFT1P37268 VTA1P2-201ENST00000520205 911 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 AC105233.3-201ENST00000531125 744 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
FDFT1P37268 AC137768.1-201ENST00000549998 553 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.25□□□□□ -1.73
FDFT1P37268 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.25□□□□□ -1.73
FDFT1P37268 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.25□□□□□ -1.73
FDFT1P37268 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.25□□□□□ -1.73
FDFT1P37268 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.25□□□□□ -1.73
FDFT1P37268 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.25□□□□□ -1.73
FDFT1P37268 MIR6730-201ENST00000622213 67 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FDFT1P37268 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
FDFT1P37268 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FDFT1P37268 ZNF962P-201ENST00000443465 3140 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.25□□□□□ -1.73
FDFT1P37268 AC096656.1-201ENST00000623826 1364 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
FDFT1P37268 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FDFT1P37268 ERCC6-202ENST00000374127 1782 ntBASIC4.25□□□□□ -1.73
FDFT1P37268 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FDFT1P37268 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FDFT1P37268 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
FDFT1P37268 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
FDFT1P37268 AC103591.2-201ENST00000265259 766 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 CYB5AP4-201ENST00000396692 399 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
FDFT1P37268 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
FDFT1P37268 RPL23AP48-201ENST00000406913 488 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 AL035696.2-201ENST00000407941 709 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 RNA5SP498-201ENST00000411342 120 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 RPL26P37-201ENST00000411983 438 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.24□□□□□ -1.73
FDFT1P37268 AL391219.1-201ENST00000422570 483 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.24□□□□□ -1.73
FDFT1P37268 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FDFT1P37268 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.24□□□□□ -1.73
FDFT1P37268 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.24□□□□□ -1.73
FDFT1P37268 HMGB3P22-202ENST00000451823 572 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 HMGB3P21-201ENST00000452483 547 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 AC009963.2-201ENST00000453431 138 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 snoU13.1-201ENST00000459157 104 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 AC109327.1-201ENST00000471666 403 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
FDFT1P37268 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.24□□□□□ -1.73
FDFT1P37268 OR52A4P-203ENST00000498233 1014 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 CDH12P2-201ENST00000504393 298 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.24□□□□□ -1.73
FDFT1P37268 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FDFT1P37268 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.24□□□□□ -1.73
FDFT1P37268 AC107016.1-201ENST00000550463 337 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FDFT1P37268 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.24□□□□□ -1.73
FDFT1P37268 AC092868.3-201ENST00000560515 784 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 AC009268.1-201ENST00000561352 1203 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 AC022884.3-201ENST00000579571 248 ntBASIC4.24□□□□□ -1.73
FDFT1P37268 SS18L2P2-201ENST00000583960 235 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms