Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.17□□□□□ -1.74
RORAP35398 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.16□□□□□ -1.74
RORAP35398 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.16□□□□□ -1.74
RORAP35398 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.16□□□□□ -1.74
RORAP35398 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
RORAP35398 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RORAP35398 AL672167.1-203ENST00000641299 2975 ntBASIC4.16□□□□□ -1.74
RORAP35398 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RORAP35398 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RORAP35398 RNA5SP479-201ENST00000364858 117 ntBASIC4.16□□□□□ -1.74
RORAP35398 RNU1-63P-201ENST00000383902 164 ntBASIC4.16□□□□□ -1.74
RORAP35398 SNORD96B-201ENST00000386148 79 ntBASIC4.16□□□□□ -1.74
RORAP35398 DHFRP5-201ENST00000406944 564 ntBASIC4.16□□□□□ -1.74
RORAP35398 RPL31P52-201ENST00000407532 367 ntBASIC4.16□□□□□ -1.74
RORAP35398 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.16□□□□□ -1.74
RORAP35398 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.16□□□□□ -1.74
RORAP35398 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.16□□□□□ -1.74
RORAP35398 NPM1P24-201ENST00000428039 894 ntBASIC4.16□□□□□ -1.74
RORAP35398 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.16□□□□□ -1.74
RORAP35398 SKP1P3-201ENST00000429280 487 ntBASIC4.16□□□□□ -1.74
RORAP35398 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RORAP35398 MTCYBP29-201ENST00000436327 1006 ntBASIC4.16□□□□□ -1.74
RORAP35398 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.16□□□□□ -1.74
RORAP35398 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.16□□□□□ -1.74
RORAP35398 AL645939.1-201ENST00000453429 797 ntBASIC4.16□□□□□ -1.74
RORAP35398 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.16□□□□□ -1.74
RORAP35398 RPS26P28-201ENST00000470806 348 ntBASIC4.16□□□□□ -1.74
RORAP35398 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.16□□□□□ -1.74
RORAP35398 AC105137.1-201ENST00000484355 562 ntBASIC4.16□□□□□ -1.74
RORAP35398 RNU6-551P-201ENST00000516661 103 ntBASIC4.16□□□□□ -1.74
RORAP35398 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.16□□□□□ -1.74
RORAP35398 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.16□□□□□ -1.74
RORAP35398 AC025884.1-201ENST00000556034 378 ntBASIC4.16□□□□□ -1.74
RORAP35398 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.16□□□□□ -1.74
RORAP35398 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.16□□□□□ -1.74
RORAP35398 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.16□□□□□ -1.74
RORAP35398 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RORAP35398 AL139286.1-201ENST00000604465 483 ntBASIC4.16□□□□□ -1.74
RORAP35398 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.16□□□□□ -1.74
RORAP35398 AC074276.2-201ENST00000619891 348 ntBASIC4.16□□□□□ -1.74
RORAP35398 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.16□□□□□ -1.74
RORAP35398 EOGT-210ENST00000615922 1931 ntBASIC4.16□□□□□ -1.74
RORAP35398 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RORAP35398 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RORAP35398 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
RORAP35398 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RORAP35398 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RORAP35398 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RORAP35398 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RORAP35398 AC017002.4-201ENST00000604721 1525 ntBASIC4.16□□□□□ -1.74
RORAP35398 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.15□□□□□ -1.74
RORAP35398 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.74
RORAP35398 NOL8P1-201ENST00000508336 3529 ntBASIC4.15□□□□□ -1.74
RORAP35398 MFSD8-220ENST00000641243 1422 ntBASIC4.15□□□□□ -1.74
RORAP35398 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
RORAP35398 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
RORAP35398 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.15□□□□□ -1.74
RORAP35398 RNA5SP307-201ENST00000362863 116 ntBASIC4.15□□□□□ -1.75
RORAP35398 RN7SKP44-201ENST00000363602 316 ntBASIC4.15□□□□□ -1.75
RORAP35398 RNA5SP515-201ENST00000364570 118 ntBASIC4.15□□□□□ -1.75
RORAP35398 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.15□□□□□ -1.75
RORAP35398 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.15□□□□□ -1.75
RORAP35398 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.15□□□□□ -1.75
RORAP35398 RNU6-564P-201ENST00000410983 104 ntBASIC4.15□□□□□ -1.75
RORAP35398 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.15□□□□□ -1.75
RORAP35398 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RORAP35398 AC244453.4-201ENST00000419150 388 ntBASIC4.15□□□□□ -1.75
RORAP35398 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.15□□□□□ -1.75
RORAP35398 RPS27AP12-201ENST00000429552 465 ntBASIC4.15□□□□□ -1.75
RORAP35398 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.15□□□□□ -1.75
RORAP35398 RPS6P12-201ENST00000432491 726 ntBASIC4.15□□□□□ -1.75
RORAP35398 MAPRE1P3-201ENST00000435438 796 ntBASIC4.15□□□□□ -1.75
RORAP35398 RPL23AP52-201ENST00000439311 478 ntBASIC4.15□□□□□ -1.75
RORAP35398 RAD1P2-201ENST00000446414 663 ntBASIC4.15□□□□□ -1.75
RORAP35398 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RORAP35398 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RORAP35398 AC009963.2-201ENST00000453431 138 ntBASIC4.15□□□□□ -1.75
RORAP35398 RPL7P19-201ENST00000469948 618 ntBASIC4.15□□□□□ -1.75
RORAP35398 AC011037.1-201ENST00000483964 558 ntBASIC4.15□□□□□ -1.75
RORAP35398 RN7SL812P-201ENST00000493791 279 ntBASIC4.15□□□□□ -1.75
RORAP35398 RN7SL691P-201ENST00000494487 301 ntBASIC4.15□□□□□ -1.75
RORAP35398 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.15□□□□□ -1.75
RORAP35398 AC069240.1-201ENST00000548774 375 ntBASIC4.15□□□□□ -1.75
RORAP35398 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.15□□□□□ -1.75
RORAP35398 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.15□□□□□ -1.75
RORAP35398 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.15□□□□□ -1.75
RORAP35398 BMS1P7-201ENST00000602440 1052 ntBASIC4.15□□□□□ -1.75
RORAP35398 AC008638.3-201ENST00000603341 463 ntBASIC4.15□□□□□ -1.75
RORAP35398 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.15□□□□□ -1.75
RORAP35398 AL118496.1-201ENST00000440201 1812 ntBASIC4.15□□□□□ -1.75
RORAP35398 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RORAP35398 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RORAP35398 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
RORAP35398 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RORAP35398 OR11H5P-202ENST00000641612 1325 ntBASIC4.15□□□□□ -1.75
RORAP35398 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RORAP35398 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RORAP35398 AL158163.1-201ENST00000603915 1649 ntBASIC4.14□□□□□ -1.75
RORAP35398 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.14□□□□□ -1.75
RORAP35398 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms