Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXA13P31271 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA13P31271 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HOXA13P31271 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HOXA13P31271 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA13P31271 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA13P31271 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA13P31271 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
HOXA13P31271 OR51H2P-202ENST00000641424 3046 ntBASIC4.99□□□□□ -1.61
HOXA13P31271 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HOXA13P31271 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA13P31271 MTCO1P18-201ENST00000455518 1419 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA13P31271 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.98□□□□□ -1.61
HOXA13P31271 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
HOXA13P31271 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA13P31271 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXA13P31271 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HOXA13P31271 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXA13P31271 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA13P31271 AP002784.2-201ENST00000397300 549 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 AL035405.1-201ENST00000400795 710 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA13P31271 RN7SKP167-201ENST00000411047 285 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXA13P31271 VTA1P1-201ENST00000414044 866 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 AC092017.2-201ENST00000427600 362 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 AL645931.1-201ENST00000439737 410 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXA13P31271 NUTF2P7-201ENST00000453086 375 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXA13P31271 RN7SL41P-201ENST00000476144 297 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXA13P31271 AC108475.1-201ENST00000507880 950 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 PARP4P3-201ENST00000510265 317 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXA13P31271 AC112198.4-201ENST00000515450 351 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA13P31271 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HOXA13P31271 AP000916.1-201ENST00000533869 835 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA13P31271 RN7SL176P-201ENST00000580352 264 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 HMGB2P1-201ENST00000591146 634 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXA13P31271 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXA13P31271 AL391001.1-201ENST00000602747 715 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 AC011458.1-201ENST00000604034 617 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 AC055764.2-201ENST00000610089 670 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 AL669942.2-201ENST00000620352 697 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 AC068880.4-201ENST00000623082 495 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 AC007546.2-201ENST00000623996 360 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 AC015726.3-201ENST00000624501 418 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 MIR3653-201ENST00000625572 110 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 FP325313.1-201ENST00000638228 703 ntBASIC4.98□□□□□ -1.61
HOXA13P31271 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA13P31271 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA13P31271 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXA13P31271 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA13P31271 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA13P31271 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA13P31271 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA13P31271 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA13P31271 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA13P31271 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
HOXA13P31271 AL121657.1-201ENST00000327215 531 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA13P31271 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA13P31271 MIR620-201ENST00000385232 95 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 AP000357.1-201ENST00000409926 1165 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA13P31271 AC062016.2-201ENST00000420950 676 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.97□□□□□ -1.61
HOXA13P31271 AC004975.1-201ENST00000428733 208 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXA13P31271 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXA13P31271 AL591623.2-201ENST00000449978 222 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HOXA13P31271 UQCRHP4-201ENST00000471686 272 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXA13P31271 AC068587.1-201ENST00000483613 781 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.97□□□□□ -1.61
HOXA13P31271 NPM1P6-201ENST00000521088 871 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 AC104115.2-201ENST00000523026 687 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA13P31271 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA13P31271 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXA13P31271 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXA13P31271 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.97□□□□□ -1.61
HOXA13P31271 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA13P31271 AC106734.1-201ENST00000568646 663 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 AC090330.1-201ENST00000588646 764 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 AC068620.3-201ENST00000602749 560 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 AC020910.2-201ENST00000603635 610 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 AC006363.1-201ENST00000603806 463 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 AC021851.1-201ENST00000608537 1082 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 AL021997.2-201ENST00000615674 271 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 AC068831.8-201ENST00000620171 435 ntBASIC4.97□□□□□ -1.61
HOXA13P31271 AC005086.4-201ENST00000623065 213 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms