Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC110768.1-201ENST00000509222 400 ntBASIC6.14□□□□□ -1.43
CLIP1P30622 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.14□□□□□ -1.43
CLIP1P30622 DUXAP2-201ENST00000519198 589 ntBASIC6.14□□□□□ -1.43
CLIP1P30622 AC233702.9-201ENST00000581528 203 ntBASIC6.14□□□□□ -1.43
CLIP1P30622 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
CLIP1P30622 OR7A8P-201ENST00000595427 913 ntBASIC6.14□□□□□ -1.43
CLIP1P30622 AL583832.1-201ENST00000603227 784 ntBASIC6.14□□□□□ -1.43
CLIP1P30622 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.14□□□□□ -1.43
CLIP1P30622 AC005972.3-201ENST00000606304 481 ntBASIC6.14□□□□□ -1.43
CLIP1P30622 AL391497.1-201ENST00000608671 547 ntBASIC6.14□□□□□ -1.43
CLIP1P30622 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.14□□□□□ -1.43
CLIP1P30622 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC6.14□□□□□ -1.43
CLIP1P30622 LINC00561-201ENST00000565815 2738 ntBASIC6.14□□□□□ -1.43
CLIP1P30622 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.14□□□□□ -1.43
CLIP1P30622 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP1P30622 AC125336.1-201ENST00000508893 2827 ntBASIC6.13□□□□□ -1.43
CLIP1P30622 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CLIP1P30622 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP1P30622 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP1P30622 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP1P30622 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CLIP1P30622 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CLIP1P30622 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP1P30622 MIR513A2-201ENST00000385249 127 ntBASIC6.13□□□□□ -1.43
CLIP1P30622 AC117434.1-201ENST00000419971 836 ntBASIC6.13□□□□□ -1.43
CLIP1P30622 KATNBL1P2-201ENST00000433311 835 ntBASIC6.13□□□□□ -1.43
CLIP1P30622 AC084198.1-201ENST00000477747 402 ntBASIC6.13□□□□□ -1.43
CLIP1P30622 UBE2CP3-201ENST00000502715 450 ntBASIC6.13□□□□□ -1.43
CLIP1P30622 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.13□□□□□ -1.43
CLIP1P30622 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.13□□□□□ -1.43
CLIP1P30622 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC6.13□□□□□ -1.43
CLIP1P30622 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.13□□□□□ -1.43
CLIP1P30622 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.13□□□□□ -1.43
CLIP1P30622 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.13□□□□□ -1.43
CLIP1P30622 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.13□□□□□ -1.43
CLIP1P30622 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP1P30622 AC007179.3-201ENST00000604976 235 ntBASIC6.13□□□□□ -1.43
CLIP1P30622 AC015722.2-201ENST00000622210 551 ntBASIC6.13□□□□□ -1.43
CLIP1P30622 AL034408.1-202ENST00000636088 415 ntBASIC6.13□□□□□ -1.43
CLIP1P30622 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC6.13□□□□□ -1.43
CLIP1P30622 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP1P30622 AL442128.2-201ENST00000620246 1824 ntBASIC6.13□□□□□ -1.43
CLIP1P30622 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CLIP1P30622 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC6.12□□□□□ -1.43
CLIP1P30622 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.12□□□□□ -1.43
CLIP1P30622 RNA5SP306-201ENST00000411087 107 ntBASIC6.12□□□□□ -1.43
CLIP1P30622 ELOCP8-201ENST00000439309 332 ntBASIC6.12□□□□□ -1.43
CLIP1P30622 AC069285.2-201ENST00000440210 275 ntBASIC6.12□□□□□ -1.43
CLIP1P30622 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.12□□□□□ -1.43
CLIP1P30622 ELOCP15-201ENST00000442090 332 ntBASIC6.12□□□□□ -1.43
CLIP1P30622 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CLIP1P30622 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC6.12□□□□□ -1.43
CLIP1P30622 RN7SL339P-201ENST00000580597 296 ntBASIC6.12□□□□□ -1.43
CLIP1P30622 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.12□□□□□ -1.43
CLIP1P30622 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC6.12□□□□□ -1.43
CLIP1P30622 UBE3AP2-201ENST00000429033 2259 ntBASIC6.12□□□□□ -1.43
CLIP1P30622 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLIP1P30622 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CLIP1P30622 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLIP1P30622 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC6.11□□□□□ -1.43
CLIP1P30622 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLIP1P30622 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.11□□□□□ -1.43
CLIP1P30622 AC233289.1-201ENST00000403700 508 ntBASIC6.11□□□□□ -1.43
CLIP1P30622 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.11□□□□□ -1.43
CLIP1P30622 OR51A6P-201ENST00000418680 1004 ntBASIC6.11□□□□□ -1.43
CLIP1P30622 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.11□□□□□ -1.43
CLIP1P30622 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.11□□□□□ -1.43
CLIP1P30622 UBDP1-202ENST00000457888 382 ntBASIC6.11□□□□□ -1.43
CLIP1P30622 AC008802.1-201ENST00000519121 791 ntBASIC6.11□□□□□ -1.43
CLIP1P30622 AC109635.6-201ENST00000525487 1113 ntBASIC6.11□□□□□ -1.43
CLIP1P30622 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.11□□□□□ -1.43
CLIP1P30622 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
CLIP1P30622 RNU1-30P-201ENST00000606575 163 ntBASIC6.11□□□□□ -1.43
CLIP1P30622 AC128687.2-201ENST00000609657 566 ntBASIC6.11□□□□□ -1.43
CLIP1P30622 AC026368.1-201ENST00000614934 690 ntBASIC6.11□□□□□ -1.43
CLIP1P30622 AL591424.2-201ENST00000617023 128 ntBASIC6.11□□□□□ -1.43
CLIP1P30622 AL139089.1-201ENST00000620372 975 ntBASIC6.11□□□□□ -1.43
CLIP1P30622 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CLIP1P30622 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLIP1P30622 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLIP1P30622 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.1□□□□□ -1.43
CLIP1P30622 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CLIP1P30622 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLIP1P30622 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC6.1□□□□□ -1.43
CLIP1P30622 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLIP1P30622 ZNF602P-201ENST00000405929 924 ntBASIC6.1□□□□□ -1.43
CLIP1P30622 SYF2P2-201ENST00000417620 583 ntBASIC6.1□□□□□ -1.43
CLIP1P30622 AC022795.1-201ENST00000473808 480 ntBASIC6.1□□□□□ -1.43
CLIP1P30622 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.1□□□□□ -1.43
CLIP1P30622 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.1□□□□□ -1.43
CLIP1P30622 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.1□□□□□ -1.43
CLIP1P30622 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.1□□□□□ -1.43
CLIP1P30622 SPATA31D2P-201ENST00000429999 4388 ntBASIC6.1□□□□□ -1.43
CLIP1P30622 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLIP1P30622 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CLIP1P30622 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.1□□□□□ -1.43
CLIP1P30622 AC233968.1-201ENST00000611212 1300 ntBASIC6.1□□□□□ -1.43
CLIP1P30622 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLIP1P30622 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC6.09□□□□□ -1.43
CLIP1P30622 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms