Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATF4P18848 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.54□□□□□ -1.52
ATF4P18848 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.54□□□□□ -1.52
ATF4P18848 RN7SKP63-201ENST00000363187 301 ntBASIC5.54□□□□□ -1.52
ATF4P18848 SNORA73B-201ENST00000363217 204 ntBASIC5.54□□□□□ -1.52
ATF4P18848 RNA5SP355-201ENST00000365317 135 ntBASIC5.54□□□□□ -1.52
ATF4P18848 FAM204BP-201ENST00000369171 701 ntBASIC5.54□□□□□ -1.52
ATF4P18848 GNG5P2-201ENST00000372054 207 ntBASIC5.54□□□□□ -1.52
ATF4P18848 SSX6-201ENST00000376932 562 ntBASIC5.54□□□□□ -1.52
ATF4P18848 RNU6-761P-201ENST00000384148 107 ntBASIC5.54□□□□□ -1.52
ATF4P18848 Y_RNA.481-201ENST00000384373 102 ntBASIC5.54□□□□□ -1.52
ATF4P18848 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.54□□□□□ -1.52
ATF4P18848 RPSAP44-201ENST00000406712 884 ntBASIC5.54□□□□□ -1.52
ATF4P18848 RN7SKP131-201ENST00000410698 301 ntBASIC5.54□□□□□ -1.52
ATF4P18848 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC5.54□□□□□ -1.52
ATF4P18848 RANP6-201ENST00000413691 644 ntBASIC5.54□□□□□ -1.52
ATF4P18848 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC5.54□□□□□ -1.52
ATF4P18848 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.54□□□□□ -1.52
ATF4P18848 AL138479.1-201ENST00000426913 484 ntBASIC5.54□□□□□ -1.52
ATF4P18848 AC006548.1-201ENST00000427470 102 ntBASIC5.54□□□□□ -1.52
ATF4P18848 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC5.54□□□□□ -1.52
ATF4P18848 VN1R34P-201ENST00000447387 883 ntBASIC5.54□□□□□ -1.52
ATF4P18848 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATF4P18848 AL591379.2-201ENST00000450223 397 ntBASIC5.54□□□□□ -1.52
ATF4P18848 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC5.54□□□□□ -1.52
ATF4P18848 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.54□□□□□ -1.52
ATF4P18848 MTCO2P29-201ENST00000465212 189 ntBASIC5.54□□□□□ -1.52
ATF4P18848 RPL23AP8-201ENST00000479812 475 ntBASIC5.54□□□□□ -1.52
ATF4P18848 AC055855.1-201ENST00000489563 579 ntBASIC5.54□□□□□ -1.52
ATF4P18848 RN7SL182P-201ENST00000496499 300 ntBASIC5.54□□□□□ -1.52
ATF4P18848 FAM92A1P2-202ENST00000504766 877 ntBASIC5.54□□□□□ -1.52
ATF4P18848 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.54□□□□□ -1.52
ATF4P18848 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC5.54□□□□□ -1.52
ATF4P18848 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
ATF4P18848 HIGD1AP3-201ENST00000515857 278 ntBASIC5.54□□□□□ -1.52
ATF4P18848 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC5.54□□□□□ -1.52
ATF4P18848 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.54□□□□□ -1.52
ATF4P18848 AC118273.2-201ENST00000532092 465 ntBASIC5.54□□□□□ -1.52
ATF4P18848 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.54□□□□□ -1.52
ATF4P18848 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.54□□□□□ -1.52
ATF4P18848 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.54□□□□□ -1.52
ATF4P18848 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
ATF4P18848 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.54□□□□□ -1.52
ATF4P18848 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.54□□□□□ -1.52
ATF4P18848 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC5.54□□□□□ -1.52
ATF4P18848 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.54□□□□□ -1.52
ATF4P18848 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.54□□□□□ -1.52
ATF4P18848 RN7SL697P-201ENST00000582484 299 ntBASIC5.54□□□□□ -1.52
ATF4P18848 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC5.54□□□□□ -1.52
ATF4P18848 AC006363.1-201ENST00000603806 463 ntBASIC5.54□□□□□ -1.52
ATF4P18848 AP000907.4-201ENST00000604143 237 ntBASIC5.54□□□□□ -1.52
ATF4P18848 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATF4P18848 AC243830.2-201ENST00000618067 630 ntBASIC5.54□□□□□ -1.52
ATF4P18848 AP006248.2-201ENST00000623309 592 ntBASIC5.54□□□□□ -1.52
ATF4P18848 AP001784.1-201ENST00000624107 428 ntBASIC5.54□□□□□ -1.52
ATF4P18848 CR381572.1-201ENST00000625098 102 ntBASIC5.54□□□□□ -1.52
ATF4P18848 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
ATF4P18848 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATF4P18848 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATF4P18848 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
ATF4P18848 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATF4P18848 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATF4P18848 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATF4P18848 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATF4P18848 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATF4P18848 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATF4P18848 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATF4P18848 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATF4P18848 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ATF4P18848 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATF4P18848 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATF4P18848 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATF4P18848 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATF4P18848 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.53□□□□□ -1.52
ATF4P18848 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.53□□□□□ -1.52
ATF4P18848 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ATF4P18848 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.53□□□□□ -1.52
ATF4P18848 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATF4P18848 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ATF4P18848 SNORA70E-201ENST00000384492 135 ntBASIC5.53□□□□□ -1.52
ATF4P18848 RNA5SP231-201ENST00000410496 138 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AC127526.1-201ENST00000417526 366 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.53□□□□□ -1.52
ATF4P18848 SLC35E1P1-201ENST00000419313 864 ntBASIC5.53□□□□□ -1.52
ATF4P18848 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC5.53□□□□□ -1.52
ATF4P18848 CLIC4P3-201ENST00000422221 752 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATF4P18848 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATF4P18848 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC5.53□□□□□ -1.52
ATF4P18848 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.53□□□□□ -1.52
ATF4P18848 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC5.53□□□□□ -1.52
ATF4P18848 AL589765.3-201ENST00000446084 462 ntBASIC5.53□□□□□ -1.52
ATF4P18848 RPL7L1P1-201ENST00000448259 785 ntBASIC5.53□□□□□ -1.52
ATF4P18848 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.53□□□□□ -1.52
ATF4P18848 PMS2P11-201ENST00000451831 574 ntBASIC5.53□□□□□ -1.52
ATF4P18848 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms