Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SETP9-201ENST00000423837 832 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 AC087650.1-201ENST00000431445 468 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 MAPRE1P3-201ENST00000435438 796 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 AC106707.2-201ENST00000484182 374 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.39□□□□□ -1.71
COL11A1P12107 AC008802.1-201ENST00000519121 791 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.39□□□□□ -1.71
COL11A1P12107 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.39□□□□□ -1.71
COL11A1P12107 AC068020.1-201ENST00000594215 661 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.39□□□□□ -1.71
COL11A1P12107 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.39□□□□□ -1.71
COL11A1P12107 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.39□□□□□ -1.71
COL11A1P12107 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A1P12107 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A1P12107 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
COL11A1P12107 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.38□□□□□ -1.71
COL11A1P12107 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.38□□□□□ -1.71
COL11A1P12107 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.38□□□□□ -1.71
COL11A1P12107 CAB39P1-201ENST00000502277 460 ntBASIC4.38□□□□□ -1.71
COL11A1P12107 PPBPP1-201ENST00000510807 373 ntBASIC4.38□□□□□ -1.71
COL11A1P12107 RN7SKP13-201ENST00000515933 244 ntBASIC4.38□□□□□ -1.71
COL11A1P12107 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.38□□□□□ -1.71
COL11A1P12107 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.38□□□□□ -1.71
COL11A1P12107 AC233702.9-201ENST00000581528 203 ntBASIC4.38□□□□□ -1.71
COL11A1P12107 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.38□□□□□ -1.71
COL11A1P12107 U6.105-201ENST00000637379 88 ntBASIC4.38□□□□□ -1.71
COL11A1P12107 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
COL11A1P12107 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A1P12107 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A1P12107 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A1P12107 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A1P12107 RNU2-65P-201ENST00000410162 185 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 AC092647.1-201ENST00000420654 287 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 EIF4EP1-201ENST00000422311 642 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 AC022795.1-201ENST00000473808 480 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.37□□□□□ -1.71
COL11A1P12107 RNA5SP164-201ENST00000516533 110 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.37□□□□□ -1.71
COL11A1P12107 GNRHR2P1-201ENST00000555315 631 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 AC243312.2-201ENST00000623340 601 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 AC119674.1-207ENST00000641355 633 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A1P12107 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A1P12107 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
COL11A1P12107 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.37□□□□□ -1.71
COL11A1P12107 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
COL11A1P12107 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A1P12107 MIR491-201ENST00000384877 84 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 AC114814.2-201ENST00000419195 485 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 AC091390.3-201ENST00000426478 338 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 AL451050.1-201ENST00000450126 415 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 PPIAP3-201ENST00000450588 505 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 RPS4XP12-201ENST00000461747 709 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.37□□□□□ -1.71
COL11A1P12107 AC074250.1-201ENST00000511117 192 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A1P12107 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.37□□□□□ -1.71
COL11A1P12107 AC020914.6-201ENST00000594327 272 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 AC012468.1-201ENST00000604888 430 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 OR7M1P-201ENST00000608946 533 ntBASIC4.37□□□□□ -1.71
COL11A1P12107 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
COL11A1P12107 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A1P12107 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A1P12107 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A1P12107 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.37□□□□□ -1.71
COL11A1P12107 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A1P12107 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A1P12107 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A1P12107 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL11A1P12107 HCFC2P1-201ENST00000392864 1592 ntBASIC4.36□□□□□ -1.71
COL11A1P12107 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL11A1P12107 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
COL11A1P12107 RNU6-316P-201ENST00000391027 107 ntBASIC4.36□□□□□ -1.71
COL11A1P12107 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.36□□□□□ -1.71
COL11A1P12107 RNA5SP208-201ENST00000516156 78 ntBASIC4.36□□□□□ -1.71
COL11A1P12107 SNORA70.18-201ENST00000516696 98 ntBASIC4.36□□□□□ -1.71
COL11A1P12107 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL11A1P12107 AC107016.1-201ENST00000550463 337 ntBASIC4.36□□□□□ -1.71
COL11A1P12107 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.36□□□□□ -1.71
COL11A1P12107 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.36□□□□□ -1.71
COL11A1P12107 AL159169.3-201ENST00000608871 561 ntBASIC4.36□□□□□ -1.71
COL11A1P12107 AC243654.2-201ENST00000612843 443 ntBASIC4.36□□□□□ -1.71
COL11A1P12107 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.36□□□□□ -1.71
COL11A1P12107 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.36□□□□□ -1.71
COL11A1P12107 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.36□□□□□ -1.71
COL11A1P12107 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL11A1P12107 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
COL11A1P12107 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.36□□□□□ -1.71
COL11A1P12107 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.36□□□□□ -1.71
COL11A1P12107 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL11A1P12107 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL11A1P12107 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.35□□□□□ -1.71
COL11A1P12107 MIR200C-201ENST00000384980 68 ntBASIC4.35□□□□□ -1.71
COL11A1P12107 SNORA3C-201ENST00000408792 125 ntBASIC4.35□□□□□ -1.71
COL11A1P12107 MTND2P15-201ENST00000418575 892 ntBASIC4.35□□□□□ -1.71
COL11A1P12107 HSPD1P21-201ENST00000436541 245 ntBASIC4.35□□□□□ -1.71
COL11A1P12107 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL11A1P12107 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.35□□□□□ -1.71
COL11A1P12107 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms