Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.89□□□□□ -1.63
TOP1P11387 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.89□□□□□ -1.63
TOP1P11387 AC021205.1-201ENST00000468797 348 ntBASIC4.89□□□□□ -1.63
TOP1P11387 AL161747.1-201ENST00000480068 358 ntBASIC4.89□□□□□ -1.63
TOP1P11387 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.89□□□□□ -1.63
TOP1P11387 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.89□□□□□ -1.63
TOP1P11387 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.89□□□□□ -1.63
TOP1P11387 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.89□□□□□ -1.63
TOP1P11387 DYNLL1P4-201ENST00000549314 266 ntBASIC4.89□□□□□ -1.63
TOP1P11387 AC027176.2-201ENST00000559166 746 ntBASIC4.89□□□□□ -1.63
TOP1P11387 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.89□□□□□ -1.63
TOP1P11387 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TOP1P11387 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.89□□□□□ -1.63
TOP1P11387 MIR3160-1-201ENST00000577972 85 ntBASIC4.89□□□□□ -1.63
TOP1P11387 AC008638.3-201ENST00000603341 463 ntBASIC4.89□□□□□ -1.63
TOP1P11387 AC010857.1-201ENST00000606398 594 ntBASIC4.89□□□□□ -1.63
TOP1P11387 AC012557.1-201ENST00000607115 611 ntBASIC4.89□□□□□ -1.63
TOP1P11387 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.89□□□□□ -1.63
TOP1P11387 ZYXP1-201ENST00000617638 118 ntBASIC4.89□□□□□ -1.63
TOP1P11387 AC092159.4-201ENST00000624944 550 ntBASIC4.89□□□□□ -1.63
TOP1P11387 RNA5SP196-201ENST00000625967 102 ntBASIC4.89□□□□□ -1.63
TOP1P11387 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.89□□□□□ -1.63
TOP1P11387 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.89□□□□□ -1.63
TOP1P11387 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TOP1P11387 AL049555.1-201ENST00000562834 1933 ntBASIC4.89□□□□□ -1.63
TOP1P11387 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TOP1P11387 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TOP1P11387 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TOP1P11387 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
TOP1P11387 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.89□□□□□ -1.63
TOP1P11387 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TOP1P11387 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.88□□□□□ -1.63
TOP1P11387 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TOP1P11387 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TOP1P11387 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TOP1P11387 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TOP1P11387 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TOP1P11387 RNU6-1251P-201ENST00000364502 107 ntBASIC4.88□□□□□ -1.63
TOP1P11387 RNA5SP515-201ENST00000364570 118 ntBASIC4.88□□□□□ -1.63
TOP1P11387 AL356967.1-201ENST00000406305 431 ntBASIC4.88□□□□□ -1.63
TOP1P11387 RNA5SP104-201ENST00000410989 118 ntBASIC4.88□□□□□ -1.63
TOP1P11387 OR8G2P-201ENST00000412796 908 ntBASIC4.88□□□□□ -1.63
TOP1P11387 AC108032.1-201ENST00000416706 207 ntBASIC4.88□□□□□ -1.63
TOP1P11387 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.88□□□□□ -1.63
TOP1P11387 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.88□□□□□ -1.63
TOP1P11387 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.88□□□□□ -1.63
TOP1P11387 RNU6-1218P-201ENST00000458990 108 ntBASIC4.88□□□□□ -1.63
TOP1P11387 AC025445.1-201ENST00000502728 300 ntBASIC4.88□□□□□ -1.63
TOP1P11387 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
TOP1P11387 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.88□□□□□ -1.63
TOP1P11387 MIR2116-201ENST00000517221 80 ntBASIC4.88□□□□□ -1.63
TOP1P11387 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.88□□□□□ -1.63
TOP1P11387 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.88□□□□□ -1.63
TOP1P11387 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.88□□□□□ -1.63
TOP1P11387 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.88□□□□□ -1.63
TOP1P11387 HNRNPCP4-201ENST00000571636 900 ntBASIC4.88□□□□□ -1.63
TOP1P11387 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.88□□□□□ -1.63
TOP1P11387 MIR6867-201ENST00000610636 67 ntBASIC4.88□□□□□ -1.63
TOP1P11387 SPATA2P1-201ENST00000431223 2055 ntBASIC4.88□□□□□ -1.63
TOP1P11387 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TOP1P11387 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
TOP1P11387 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.88□□□□□ -1.63
TOP1P11387 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TOP1P11387 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.88□□□□□ -1.63
TOP1P11387 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TOP1P11387 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TOP1P11387 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TOP1P11387 AL592437.2-201ENST00000421655 2434 ntBASIC4.87□□□□□ -1.63
TOP1P11387 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.87□□□□□ -1.63
TOP1P11387 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
TOP1P11387 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TOP1P11387 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TOP1P11387 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TOP1P11387 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TOP1P11387 ENSAP1-201ENST00000392855 326 ntBASIC4.87□□□□□ -1.63
TOP1P11387 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.87□□□□□ -1.63
TOP1P11387 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.87□□□□□ -1.63
TOP1P11387 OR6C71P-201ENST00000432580 913 ntBASIC4.87□□□□□ -1.63
TOP1P11387 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.87□□□□□ -1.63
TOP1P11387 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.87□□□□□ -1.63
TOP1P11387 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.87□□□□□ -1.63
TOP1P11387 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.87□□□□□ -1.63
TOP1P11387 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.87□□□□□ -1.63
TOP1P11387 RPL31P53-201ENST00000457065 348 ntBASIC4.87□□□□□ -1.63
TOP1P11387 RN7SL604P-201ENST00000492589 296 ntBASIC4.87□□□□□ -1.63
TOP1P11387 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TOP1P11387 NDUFB4P12-201ENST00000513465 390 ntBASIC4.87□□□□□ -1.63
TOP1P11387 AC108471.1-201ENST00000513977 287 ntBASIC4.87□□□□□ -1.63
TOP1P11387 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.87□□□□□ -1.63
TOP1P11387 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.87□□□□□ -1.63
TOP1P11387 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.87□□□□□ -1.63
TOP1P11387 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.87□□□□□ -1.63
TOP1P11387 AC124068.1-201ENST00000563131 678 ntBASIC4.87□□□□□ -1.63
TOP1P11387 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.87□□□□□ -1.63
TOP1P11387 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TOP1P11387 FAM60CP-201ENST00000591086 664 ntBASIC4.87□□□□□ -1.63
TOP1P11387 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TOP1P11387 PSMA6P4-201ENST00000603247 718 ntBASIC4.87□□□□□ -1.63
TOP1P11387 AL137246.1-201ENST00000607072 977 ntBASIC4.87□□□□□ -1.63
TOP1P11387 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms