Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOC1P02654 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
APOC1P02654 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
APOC1P02654 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
APOC1P02654 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOC1P02654 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOC1P02654 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOC1P02654 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOC1P02654 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
APOC1P02654 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
APOC1P02654 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
APOC1P02654 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOC1P02654 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
APOC1P02654 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
APOC1P02654 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.67□□□□□ -1.82
APOC1P02654 AC069213.2-201ENST00000420238 366 ntBASIC3.67□□□□□ -1.82
APOC1P02654 RPS29P17-201ENST00000430795 166 ntBASIC3.67□□□□□ -1.82
APOC1P02654 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.67□□□□□ -1.82
APOC1P02654 RPL23AP52-201ENST00000439311 478 ntBASIC3.67□□□□□ -1.82
APOC1P02654 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.67□□□□□ -1.82
APOC1P02654 AC009963.2-201ENST00000453431 138 ntBASIC3.67□□□□□ -1.82
APOC1P02654 AL354710.1-201ENST00000453641 246 ntBASIC3.67□□□□□ -1.82
APOC1P02654 RPL7P48-201ENST00000461513 746 ntBASIC3.67□□□□□ -1.82
APOC1P02654 AC109458.1-201ENST00000508858 316 ntBASIC3.67□□□□□ -1.82
APOC1P02654 RNA5SP143-201ENST00000516936 115 ntBASIC3.67□□□□□ -1.82
APOC1P02654 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.67□□□□□ -1.82
APOC1P02654 PDCL2P2-201ENST00000533651 189 ntBASIC3.67□□□□□ -1.82
APOC1P02654 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.67□□□□□ -1.82
APOC1P02654 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.67□□□□□ -1.82
APOC1P02654 AL354984.3-201ENST00000604803 325 ntBASIC3.67□□□□□ -1.82
APOC1P02654 AL592436.1-201ENST00000605135 558 ntBASIC3.67□□□□□ -1.82
APOC1P02654 AC024940.4-201ENST00000605507 246 ntBASIC3.67□□□□□ -1.82
APOC1P02654 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.67□□□□□ -1.82
APOC1P02654 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.67□□□□□ -1.82
APOC1P02654 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
APOC1P02654 AL132640.2-201ENST00000559968 1698 ntBASIC3.67□□□□□ -1.82
APOC1P02654 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOC1P02654 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.67□□□□□ -1.82
APOC1P02654 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
APOC1P02654 ZNF962P-201ENST00000443465 3140 ntBASIC3.67□□□□□ -1.82
APOC1P02654 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOC1P02654 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOC1P02654 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.67□□□□□ -1.82
APOC1P02654 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOC1P02654 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOC1P02654 OR4K17-201ENST00000315543 1032 ntBASIC3.66□□□□□ -1.82
APOC1P02654 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOC1P02654 RN7SKP235-201ENST00000410662 305 ntBASIC3.66□□□□□ -1.82
APOC1P02654 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.66□□□□□ -1.82
APOC1P02654 AL356535.1-201ENST00000440335 398 ntBASIC3.66□□□□□ -1.82
APOC1P02654 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.66□□□□□ -1.82
APOC1P02654 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.66□□□□□ -1.82
APOC1P02654 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.66□□□□□ -1.82
APOC1P02654 RPS29P22-201ENST00000472363 168 ntBASIC3.66□□□□□ -1.82
APOC1P02654 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.66□□□□□ -1.82
APOC1P02654 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.66□□□□□ -1.82
APOC1P02654 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.66□□□□□ -1.82
APOC1P02654 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.66□□□□□ -1.82
APOC1P02654 AC012603.1-201ENST00000606424 528 ntBASIC3.66□□□□□ -1.82
APOC1P02654 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.66□□□□□ -1.82
APOC1P02654 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.66□□□□□ -1.82
APOC1P02654 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.66□□□□□ -1.82
APOC1P02654 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
APOC1P02654 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
APOC1P02654 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
APOC1P02654 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.66□□□□□ -1.82
APOC1P02654 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOC1P02654 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
APOC1P02654 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
APOC1P02654 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.65□□□□□ -1.82
APOC1P02654 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
APOC1P02654 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
APOC1P02654 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
APOC1P02654 RNA5SP36-201ENST00000410197 133 ntBASIC3.65□□□□□ -1.83
APOC1P02654 AC011933.1-201ENST00000413334 321 ntBASIC3.65□□□□□ -1.83
APOC1P02654 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
APOC1P02654 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.65□□□□□ -1.83
APOC1P02654 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.65□□□□□ -1.83
APOC1P02654 USP9YP31-201ENST00000431405 881 ntBASIC3.65□□□□□ -1.83
APOC1P02654 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.65□□□□□ -1.83
APOC1P02654 LYPLA1P1-201ENST00000434514 622 ntBASIC3.65□□□□□ -1.83
APOC1P02654 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.65□□□□□ -1.83
APOC1P02654 ACTR3P2-201ENST00000439585 1257 ntBASIC3.65□□□□□ -1.83
APOC1P02654 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.65□□□□□ -1.83
APOC1P02654 AC116533.1-201ENST00000459748 321 ntBASIC3.65□□□□□ -1.83
APOC1P02654 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.65□□□□□ -1.83
APOC1P02654 AP001086.1-201ENST00000494882 321 ntBASIC3.65□□□□□ -1.83
APOC1P02654 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.65□□□□□ -1.83
APOC1P02654 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.65□□□□□ -1.83
APOC1P02654 AC010476.1-201ENST00000519111 851 ntBASIC3.65□□□□□ -1.83
APOC1P02654 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.65□□□□□ -1.83
APOC1P02654 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.65□□□□□ -1.83
APOC1P02654 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.65□□□□□ -1.83
APOC1P02654 AC079171.1-201ENST00000568788 914 ntBASIC3.65□□□□□ -1.83
APOC1P02654 MIR3186-201ENST00000577404 85 ntBASIC3.65□□□□□ -1.83
APOC1P02654 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.65□□□□□ -1.83
APOC1P02654 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
APOC1P02654 AC022146.1-201ENST00000595307 847 ntBASIC3.65□□□□□ -1.83
APOC1P02654 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.65□□□□□ -1.83
APOC1P02654 AC104662.1-201ENST00000604448 511 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms