Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFBP01127 MIR449B-201ENST00000384995 97 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 ARL4AP5-201ENST00000404372 599 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 RN7SKP16-201ENST00000410180 299 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 AC019070.1-201ENST00000415008 1024 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.55□□□□□ -1.68
PDGFBP01127 CR848007.2-201ENST00000424918 787 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 SEC63P1-201ENST00000425785 1258 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 TCEA1P3-201ENST00000443005 880 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 RPL23AP43-201ENST00000446445 471 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFBP01127 RPL5P32-201ENST00000454085 879 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 AC093166.2-201ENST00000455969 1017 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 AC025164.1-201ENST00000496249 478 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 RPS27AP13-201ENST00000498403 237 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 AC025459.1-201ENST00000504072 156 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 MTCO1P31-201ENST00000506355 492 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.55□□□□□ -1.68
PDGFBP01127 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.55□□□□□ -1.68
PDGFBP01127 AC010285.3-201ENST00000511668 676 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PDGFBP01127 MIR3200-201ENST00000580767 85 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.55□□□□□ -1.68
PDGFBP01127 AC025175.1-201ENST00000606482 759 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 AC017076.1-201ENST00000607613 578 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFBP01127 AL162574.1-201ENST00000615702 950 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.55□□□□□ -1.68
PDGFBP01127 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFBP01127 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PDGFBP01127 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFBP01127 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFBP01127 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFBP01127 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PDGFBP01127 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFBP01127 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFBP01127 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.55□□□□□ -1.68
PDGFBP01127 AC135352.1-201ENST00000506173 1418 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFBP01127 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.54□□□□□ -1.68
PDGFBP01127 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.54□□□□□ -1.68
PDGFBP01127 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFBP01127 NEAT1-202ENST00000501122 22743 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.54□□□□□ -1.68
PDGFBP01127 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFBP01127 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
PDGFBP01127 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PDGFBP01127 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PDGFBP01127 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 RNA5SP124-201ENST00000362739 110 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFBP01127 RN7SKP97-201ENST00000410966 333 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 USP9YP19-201ENST00000412165 485 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 MTND4P11-201ENST00000417020 1058 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.54□□□□□ -1.68
PDGFBP01127 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFBP01127 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.54□□□□□ -1.68
PDGFBP01127 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFBP01127 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.54□□□□□ -1.68
PDGFBP01127 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.54□□□□□ -1.68
PDGFBP01127 AL133547.1-201ENST00000448546 220 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 AL500522.2-201ENST00000448562 343 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 MTND2P25-201ENST00000449028 610 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 TPT1P3-201ENST00000492841 512 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 AC111193.1-201ENST00000504097 155 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.54□□□□□ -1.68
PDGFBP01127 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.54□□□□□ -1.68
PDGFBP01127 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.54□□□□□ -1.68
PDGFBP01127 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.54□□□□□ -1.68
PDGFBP01127 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFBP01127 AC005520.3-201ENST00000602874 370 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 AC092474.3-201ENST00000603022 568 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 SUMO2P14-201ENST00000604488 293 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 AC015802.5-201ENST00000607478 399 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.54□□□□□ -1.68
PDGFBP01127 uc_338.13-201ENST00000618243 179 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
PDGFBP01127 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PDGFBP01127 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFBP01127 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFBP01127 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFBP01127 MAPK10-349ENST00000641767 3661 ntBASIC4.54□□□□□ -1.68
PDGFBP01127 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.54□□□□□ -1.68
PDGFBP01127 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFBP01127 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PDGFBP01127 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
PDGFBP01127 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.54□□□□□ -1.68
PDGFBP01127 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFBP01127 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.53□□□□□ -1.68
PDGFBP01127 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFBP01127 AC032011.1-201ENST00000611703 1549 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFBP01127 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
PDGFBP01127 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
PDGFBP01127 SNORD115-48-201ENST00000364764 76 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 RNU6-40P-201ENST00000384254 107 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 SDHCP2-201ENST00000398565 501 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 AL583835.1-201ENST00000399570 407 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms