Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 RNU4-40P-201ENST00000364351 143 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 RNU4-31P-201ENST00000384211 141 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 MIR449B-201ENST00000384995 97 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 AC119751.3-201ENST00000399720 670 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 AL049545.1-201ENST00000401856 572 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 RN7SKP97-201ENST00000410966 333 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 RN7SKP17-201ENST00000411242 351 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 PDSS1P1-201ENST00000422953 1114 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 AL136231.1-201ENST00000429407 730 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 AC093716.1-201ENST00000435923 377 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 Z83846.1-201ENST00000446798 265 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 SEPT14P24-201ENST00000447236 180 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 BTG4P1-201ENST00000510421 183 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 AC093752.1-206ENST00000511823 336 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 RN7SKP67-201ENST00000515905 235 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 OR5BC1P-201ENST00000529327 739 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 AC012254.4-201ENST00000588843 273 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 GAS5-AS1-201ENST00000602767 694 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 AC018618.2-201ENST00000604770 446 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 AC024060.1-201ENST00000607052 494 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 AC099669.2-201ENST00000616549 437 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 uc_338.13-201ENST00000618243 179 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 AL158062.1-201ENST00000619632 745 ntBASIC6.81□□□□□ -1.32
RAPGEF3O95398 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RAPGEF3O95398 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RAPGEF3O95398 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RAPGEF3O95398 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RAPGEF3O95398 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RAPGEF3O95398 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.81□□□□□ -1.32
RAPGEF3O95398 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RAPGEF3O95398 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
RAPGEF3O95398 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
RAPGEF3O95398 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 AL391684.1-202ENST00000641293 1636 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RAPGEF3O95398 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
RAPGEF3O95398 RNU6-932P-201ENST00000391108 106 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 RNU6ATAC-201ENST00000408749 126 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 AC069157.1-201ENST00000421749 137 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 ARAFP2-201ENST00000440565 559 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 CALM1P2-201ENST00000452941 448 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 AC098799.3-201ENST00000506095 438 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 AC016559.2-201ENST00000510759 359 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 OR4A6P-201ENST00000534364 970 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 CCNG2P1-201ENST00000549521 1000 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 SNORD39.2-201ENST00000579995 76 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 RN7SL622P-201ENST00000585292 275 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RAPGEF3O95398 FRG1EP-201ENST00000634469 770 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 AC090897.3-201ENST00000636973 1157 ntBASIC6.8□□□□□ -1.32
RAPGEF3O95398 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RAPGEF3O95398 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RAPGEF3O95398 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
RAPGEF3O95398 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
RAPGEF3O95398 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
RAPGEF3O95398 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 AP000432.2-201ENST00000624164 2048 ntBASIC6.79□□□□□ -1.32
RAPGEF3O95398 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RAPGEF3O95398 MTCO1P18-201ENST00000455518 1419 ntBASIC6.79□□□□□ -1.32
RAPGEF3O95398 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RAPGEF3O95398 MIR200C-201ENST00000384980 68 ntBASIC6.79□□□□□ -1.32
RAPGEF3O95398 AC233289.1-201ENST00000403700 508 ntBASIC6.79□□□□□ -1.32
RAPGEF3O95398 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms