Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RNA5SP322-201ENST00000363617 119 ntBASIC4.33□□□□□ -1.72
SNX3O60493 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX3O60493 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX3O60493 SNORD65C-201ENST00000390962 71 ntBASIC4.33□□□□□ -1.72
SNX3O60493 AL031985.1-201ENST00000392713 418 ntBASIC4.33□□□□□ -1.72
SNX3O60493 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX3O60493 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.33□□□□□ -1.72
SNX3O60493 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX3O60493 RBMY1KP-201ENST00000423480 476 ntBASIC4.33□□□□□ -1.72
SNX3O60493 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.33□□□□□ -1.72
SNX3O60493 RPS26P47-201ENST00000427219 348 ntBASIC4.33□□□□□ -1.72
SNX3O60493 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX3O60493 NPM1P24-201ENST00000428039 894 ntBASIC4.33□□□□□ -1.72
SNX3O60493 RPL7P4-203ENST00000430239 730 ntBASIC4.33□□□□□ -1.72
SNX3O60493 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX3O60493 TPTE2P3-201ENST00000441562 1189 ntBASIC4.33□□□□□ -1.72
SNX3O60493 SPRYD7P1-201ENST00000443861 570 ntBASIC4.33□□□□□ -1.72
SNX3O60493 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.33□□□□□ -1.72
SNX3O60493 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.33□□□□□ -1.72
SNX3O60493 AL161747.1-201ENST00000480068 358 ntBASIC4.33□□□□□ -1.72
SNX3O60493 PPIAP19-201ENST00000486414 492 ntBASIC4.33□□□□□ -1.72
SNX3O60493 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX3O60493 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX3O60493 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
SNX3O60493 RN7SL808P-201ENST00000496066 299 ntBASIC4.33□□□□□ -1.72
SNX3O60493 AC108693.1-201ENST00000496068 432 ntBASIC4.33□□□□□ -1.72
SNX3O60493 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNX3O60493 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.33□□□□□ -1.72
SNX3O60493 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX3O60493 AC007016.1-201ENST00000512110 244 ntBASIC4.33□□□□□ -1.72
SNX3O60493 RNA5SP228-201ENST00000516232 133 ntBASIC4.33□□□□□ -1.72
SNX3O60493 HMGB1P23-201ENST00000518743 568 ntBASIC4.33□□□□□ -1.72
SNX3O60493 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.33□□□□□ -1.72
SNX3O60493 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX3O60493 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX3O60493 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.33□□□□□ -1.72
SNX3O60493 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX3O60493 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.33□□□□□ -1.72
SNX3O60493 AC008521.2-201ENST00000591021 259 ntBASIC4.33□□□□□ -1.72
SNX3O60493 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
SNX3O60493 AC097504.2-201ENST00000608088 454 ntBASIC4.33□□□□□ -1.72
SNX3O60493 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX3O60493 AC124016.2-201ENST00000610058 665 ntBASIC4.33□□□□□ -1.72
SNX3O60493 AL512427.1-201ENST00000618593 349 ntBASIC4.33□□□□□ -1.72
SNX3O60493 AC126544.2-201ENST00000625174 749 ntBASIC4.33□□□□□ -1.72
SNX3O60493 AL356118.1-201ENST00000635272 1078 ntBASIC4.33□□□□□ -1.72
SNX3O60493 ATE1-AS1-202ENST00000636460 506 ntBASIC4.33□□□□□ -1.72
SNX3O60493 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX3O60493 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNX3O60493 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SNX3O60493 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
SNX3O60493 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX3O60493 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNX3O60493 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNX3O60493 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX3O60493 AC100871.1-201ENST00000507871 1456 ntBASIC4.32□□□□□ -1.72
SNX3O60493 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNX3O60493 AL627171.1-201ENST00000618845 1308 ntBASIC4.32□□□□□ -1.72
SNX3O60493 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNX3O60493 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
SNX3O60493 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNX3O60493 U6.112-201ENST00000384129 70 ntBASIC4.32□□□□□ -1.72
SNX3O60493 RSL24D1P1-201ENST00000404972 493 ntBASIC4.32□□□□□ -1.72
SNX3O60493 SNORA3C-201ENST00000408792 125 ntBASIC4.32□□□□□ -1.72
SNX3O60493 MIR1282-201ENST00000408865 101 ntBASIC4.32□□□□□ -1.72
SNX3O60493 RNU6-603P-201ENST00000411403 107 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC092745.2-202ENST00000411880 369 ntBASIC4.32□□□□□ -1.72
SNX3O60493 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX3O60493 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.32□□□□□ -1.72
SNX3O60493 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.32□□□□□ -1.72
SNX3O60493 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX3O60493 RPS29P14-201ENST00000431518 171 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX3O60493 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX3O60493 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX3O60493 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX3O60493 AC000041.1-201ENST00000439655 175 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX3O60493 HMGB1P16-201ENST00000447155 540 ntBASIC4.32□□□□□ -1.72
SNX3O60493 RPL7L1P1-201ENST00000448259 785 ntBASIC4.32□□□□□ -1.72
SNX3O60493 MTATP6P14-201ENST00000455189 673 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX3O60493 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX3O60493 RPS4XP6-201ENST00000477670 797 ntBASIC4.32□□□□□ -1.72
SNX3O60493 HMGB1P38-201ENST00000490557 577 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AL035404.1-201ENST00000497982 568 ntBASIC4.32□□□□□ -1.72
SNX3O60493 GAPDHP56-201ENST00000506031 988 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC119751.4-201ENST00000507498 357 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC109458.1-201ENST00000508858 316 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC010285.3-201ENST00000511668 676 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX3O60493 MTATP6P9-201ENST00000515039 680 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX3O60493 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX3O60493 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX3O60493 AC107918.3-201ENST00000533272 382 ntBASIC4.32□□□□□ -1.72
SNX3O60493 GCSHP4-201ENST00000538792 439 ntBASIC4.32□□□□□ -1.72
SNX3O60493 AC092490.3-201ENST00000545370 572 ntBASIC4.32□□□□□ -1.72
SNX3O60493 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX3O60493 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms