Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CYCSP53-201ENST00000455540 265 ntBASIC6.9□□□□□ -1.31
CUX2O14529 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.9□□□□□ -1.31
CUX2O14529 AC097462.2-201ENST00000504623 481 ntBASIC6.9□□□□□ -1.31
CUX2O14529 RNU6-237P-201ENST00000515985 71 ntBASIC6.9□□□□□ -1.31
CUX2O14529 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CUX2O14529 AC124068.1-201ENST00000563131 678 ntBASIC6.9□□□□□ -1.31
CUX2O14529 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.9□□□□□ -1.31
CUX2O14529 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CUX2O14529 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC6.9□□□□□ -1.31
CUX2O14529 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
CUX2O14529 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CUX2O14529 AC097634.1-201ENST00000604491 2467 ntBASIC6.89□□□□□ -1.31
CUX2O14529 AC005183.1-201ENST00000603687 1979 ntBASIC6.89□□□□□ -1.31
CUX2O14529 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.89□□□□□ -1.31
CUX2O14529 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CUX2O14529 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CUX2O14529 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CUX2O14529 RNU1-44P-201ENST00000384453 163 ntBASIC6.89□□□□□ -1.31
CUX2O14529 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CUX2O14529 TAF9BP1-201ENST00000396646 746 ntBASIC6.89□□□□□ -1.31
CUX2O14529 MTND2P15-201ENST00000418575 892 ntBASIC6.89□□□□□ -1.31
CUX2O14529 AL139247.1-201ENST00000422768 325 ntBASIC6.89□□□□□ -1.31
CUX2O14529 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC6.89□□□□□ -1.31
CUX2O14529 AP000563.1-201ENST00000490865 758 ntBASIC6.89□□□□□ -1.31
CUX2O14529 DEFB109F-201ENST00000491870 277 ntBASIC6.89□□□□□ -1.31
CUX2O14529 RNU6-513P-201ENST00000516104 104 ntBASIC6.89□□□□□ -1.31
CUX2O14529 RPL12P22-201ENST00000519073 490 ntBASIC6.89□□□□□ -1.31
CUX2O14529 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.89□□□□□ -1.31
CUX2O14529 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.89□□□□□ -1.31
CUX2O14529 LARP7P3-201ENST00000579888 337 ntBASIC6.89□□□□□ -1.31
CUX2O14529 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.89□□□□□ -1.31
CUX2O14529 AC005086.4-201ENST00000623065 213 ntBASIC6.89□□□□□ -1.31
CUX2O14529 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CUX2O14529 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CUX2O14529 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CUX2O14529 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CUX2O14529 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CUX2O14529 ZNF90P1-201ENST00000480493 1951 ntBASIC6.89□□□□□ -1.31
CUX2O14529 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.88□□□□□ -1.31
CUX2O14529 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CUX2O14529 MIR1179-201ENST00000408703 91 ntBASIC6.88□□□□□ -1.31
CUX2O14529 RNA5SP80-201ENST00000410475 111 ntBASIC6.88□□□□□ -1.31
CUX2O14529 TCEA1P2-201ENST00000420496 906 ntBASIC6.88□□□□□ -1.31
CUX2O14529 Y_RNA.638-201ENST00000459374 113 ntBASIC6.88□□□□□ -1.31
CUX2O14529 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.88□□□□□ -1.31
CUX2O14529 NDUFA5P2-201ENST00000519723 344 ntBASIC6.88□□□□□ -1.31
CUX2O14529 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.88□□□□□ -1.31
CUX2O14529 MIR5187-201ENST00000583479 76 ntBASIC6.88□□□□□ -1.31
CUX2O14529 AL137849.1-201ENST00000604767 169 ntBASIC6.88□□□□□ -1.31
CUX2O14529 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CUX2O14529 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CUX2O14529 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.88□□□□□ -1.31
CUX2O14529 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CUX2O14529 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.88□□□□□ -1.31
CUX2O14529 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CUX2O14529 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUX2O14529 IL6STP1-201ENST00000346911 1020 ntBASIC6.87□□□□□ -1.31
CUX2O14529 SNORD66.1-201ENST00000391230 76 ntBASIC6.87□□□□□ -1.31
CUX2O14529 RPL23AP25-201ENST00000430973 463 ntBASIC6.87□□□□□ -1.31
CUX2O14529 AC096576.1-201ENST00000489014 359 ntBASIC6.87□□□□□ -1.31
CUX2O14529 KRT19P6-201ENST00000510983 209 ntBASIC6.87□□□□□ -1.31
CUX2O14529 AC006960.3-201ENST00000561845 705 ntBASIC6.87□□□□□ -1.31
CUX2O14529 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC6.87□□□□□ -1.31
CUX2O14529 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.87□□□□□ -1.31
CUX2O14529 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUX2O14529 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUX2O14529 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUX2O14529 SUPT16HP1-201ENST00000537175 3133 ntBASIC6.87□□□□□ -1.31
CUX2O14529 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUX2O14529 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC6.87□□□□□ -1.31
CUX2O14529 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUX2O14529 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUX2O14529 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CUX2O14529 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6.87□□□□□ -1.31
CUX2O14529 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUX2O14529 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CUX2O14529 MAPK10-286ENST00000641208 8747 ntBASIC6.86□□□□□ -1.31
CUX2O14529 OOSP1P1-201ENST00000423265 274 ntBASIC6.86□□□□□ -1.31
CUX2O14529 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.86□□□□□ -1.31
CUX2O14529 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.86□□□□□ -1.31
CUX2O14529 ATP6V1G1P6-201ENST00000504007 334 ntBASIC6.86□□□□□ -1.31
CUX2O14529 AC026784.1-201ENST00000507986 352 ntBASIC6.86□□□□□ -1.31
CUX2O14529 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CUX2O14529 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CUX2O14529 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.86□□□□□ -1.31
CUX2O14529 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC6.86□□□□□ -1.31
CUX2O14529 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.86□□□□□ -1.31
CUX2O14529 SNORD91B-202ENST00000608459 222 ntBASIC6.86□□□□□ -1.31
CUX2O14529 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CUX2O14529 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CUX2O14529 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.86□□□□□ -1.31
CUX2O14529 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CUX2O14529 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.86□□□□□ -1.31
CUX2O14529 RNA5SP51-201ENST00000364750 119 ntBASIC6.85□□□□□ -1.31
CUX2O14529 MIR1251-201ENST00000408552 70 ntBASIC6.85□□□□□ -1.31
CUX2O14529 AC005300.1-201ENST00000428401 373 ntBASIC6.85□□□□□ -1.31
CUX2O14529 CYCSP4-201ENST00000429682 331 ntBASIC6.85□□□□□ -1.31
CUX2O14529 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CUX2O14529 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.85□□□□□ -1.31
CUX2O14529 AC090013.1-201ENST00000485147 480 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 446.7 ms