Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.32□□□□□ -1.56
FOXN3O00409 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXN3O00409 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
FOXN3O00409 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXN3O00409 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.32□□□□□ -1.56
FOXN3O00409 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXN3O00409 AC090695.1-201ENST00000561269 1222 ntBASIC5.32□□□□□ -1.56
FOXN3O00409 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXN3O00409 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXN3O00409 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXN3O00409 SUMO2P15-201ENST00000604285 278 ntBASIC5.32□□□□□ -1.56
FOXN3O00409 TAS2R6P-201ENST00000605022 826 ntBASIC5.32□□□□□ -1.56
FOXN3O00409 AP003392.5-201ENST00000607857 415 ntBASIC5.32□□□□□ -1.56
FOXN3O00409 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXN3O00409 AC022509.4-201ENST00000621404 572 ntBASIC5.32□□□□□ -1.56
FOXN3O00409 AL157770.1-201ENST00000623049 439 ntBASIC5.32□□□□□ -1.56
FOXN3O00409 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXN3O00409 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
FOXN3O00409 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
FOXN3O00409 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXN3O00409 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXN3O00409 ECM1P2-201ENST00000503354 1577 ntBASIC5.32□□□□□ -1.56
FOXN3O00409 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXN3O00409 Z99496.1-201ENST00000469424 1477 ntBASIC5.32□□□□□ -1.56
FOXN3O00409 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
FOXN3O00409 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXN3O00409 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
FOXN3O00409 AC000374.1-201ENST00000434698 1745 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXN3O00409 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXN3O00409 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXN3O00409 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXN3O00409 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
FOXN3O00409 AC011155.1-201ENST00000316512 456 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 Y_RNA.465-201ENST00000384293 102 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 RNU1-106P-201ENST00000384382 164 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXN3O00409 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXN3O00409 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXN3O00409 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXN3O00409 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXN3O00409 SEPT7P5-201ENST00000434048 306 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXN3O00409 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXN3O00409 RPL12P46-201ENST00000436610 195 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 RPL23AP76-201ENST00000441860 458 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 MTND2P22-201ENST00000444325 1033 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXN3O00409 VN1R40P-201ENST00000455196 941 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 RN7SL727P-201ENST00000482164 296 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXN3O00409 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXN3O00409 AC034244.1-201ENST00000507687 207 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXN3O00409 TCP11X3P-202ENST00000514289 1254 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 AC138938.1-201ENST00000515431 782 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 SNORA3.4-201ENST00000515969 96 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXN3O00409 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXN3O00409 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXN3O00409 AC004217.3-201ENST00000551552 878 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXN3O00409 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXN3O00409 MIR3691-201ENST00000578066 90 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 MIR4691-201ENST00000583764 85 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXN3O00409 AC006116.3-201ENST00000592968 361 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.31□□□□□ -1.56
FOXN3O00409 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 AP003973.1-201ENST00000604639 691 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 AL139344.1-201ENST00000605228 195 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 AC090948.2-201ENST00000607363 564 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXN3O00409 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXN3O00409 AL512624.1-201ENST00000613638 469 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 AL049794.2-201ENST00000616301 365 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
FOXN3O00409 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXN3O00409 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
FOXN3O00409 AL590763.1-201ENST00000398297 1545 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXN3O00409 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXN3O00409 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXN3O00409 AC134882.1-201ENST00000603738 1676 ntBASIC5.31□□□□□ -1.56
FOXN3O00409 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXN3O00409 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
FOXN3O00409 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
FOXN3O00409 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXN3O00409 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXN3O00409 MUC2-202ENST00000613187 4845 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 CASC19-204ENST00000641001 2055 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXN3O00409 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXN3O00409 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
FOXN3O00409 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXN3O00409 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXN3O00409 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms