Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RPL7P57-201ENST00000423238 740 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 RBMY2QP-201ENST00000429799 1147 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 PTGES3P1-201ENST00000439531 483 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 RPS26P2-201ENST00000440331 348 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 SLC25A18P1-201ENST00000449385 454 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 RPL7P31-201ENST00000450192 724 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 OR2AF1P-201ENST00000454899 889 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC079203.1-201ENST00000487972 404 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 GAPDHP56-201ENST00000506031 988 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 BTF3P13-201ENST00000513224 490 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC110775.1-201ENST00000513721 462 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 SOD1P3-201ENST00000518682 454 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 NPM1P6-201ENST00000521088 871 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 NDUFS5P6-201ENST00000529136 295 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC133555.2-201ENST00000550213 292 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 AL606834.3-201ENST00000602615 496 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC087763.1-201ENST00000603391 286 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 RPAP2P1-201ENST00000603626 1168 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AL445222.1-201ENST00000607259 628 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AP000255.1-201ENST00000610276 676 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC091905.4-201ENST00000623432 202 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC112694.2-201ENST00000623697 768 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC073342.3-201ENST00000624211 193 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AC068620.4-201ENST00000636730 1182 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SRRM4A7MD48 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SRRM4A7MD48 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
SRRM4A7MD48 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SRRM4A7MD48 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SRRM4A7MD48 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SRRM4A7MD48 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SRRM4A7MD48 EIF2AP4-201ENST00000424793 1781 ntBASIC3.83□□□□□ -1.8
SRRM4A7MD48 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SRRM4A7MD48 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SRRM4A7MD48 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SRRM4A7MD48 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SRRM4A7MD48 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SRRM4A7MD48 AC138393.1-206ENST00000540997 1886 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 NEAT1-202ENST00000501122 22743 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 AC109780.1-201ENST00000451768 1344 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 CIR1P2-201ENST00000514821 1342 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SRRM4A7MD48 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 RN7SKP104-201ENST00000362605 328 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 AL590762.2-201ENST00000395798 571 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 RN7SKP213-201ENST00000410746 298 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 DPPA2P3-201ENST00000411853 655 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 MTND4P3-201ENST00000417829 541 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 OR6C64P-201ENST00000419708 825 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 TMX2P1-201ENST00000436507 708 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 PRPF38AP2-201ENST00000438179 851 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 RPS26P30-201ENST00000443431 335 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 AC010733.1-201ENST00000451515 401 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 AURKAPS2-201ENST00000454983 333 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 NAP1L1P3-201ENST00000462291 880 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 RPL21P71-201ENST00000465598 459 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 RN7SL808P-201ENST00000496066 299 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 RN7SL591P-201ENST00000496150 292 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SRRM4A7MD48 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms