Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AL031119.1-201ENST00000404707 1879 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 MTCO1P7-201ENST00000419523 1542 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 OR56B2P-201ENST00000317102 954 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 SNORA51.1-201ENST00000363243 140 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 snoZ40.1-201ENST00000364540 72 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 RNU6-317P-201ENST00000384031 107 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 RNU6-575P-201ENST00000411326 105 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AL008987.1-201ENST00000415528 237 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 GAPDHP49-201ENST00000421421 961 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 SETD6P1-201ENST00000444575 317 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 SLC25A18P1-201ENST00000449385 454 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC016724.1-201ENST00000453215 421 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AURKAPS2-201ENST00000454983 333 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 RPL23AP12-201ENST00000467573 473 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 NDUFA5P9-201ENST00000472609 340 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC117394.1-201ENST00000477323 567 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 DEFB109F-201ENST00000491870 277 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC104971.1-201ENST00000495117 578 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC006499.3-201ENST00000506077 748 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 RNU6-416P-201ENST00000516265 103 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC023632.1-201ENST00000518463 375 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC010306.1-201ENST00000523223 1117 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AP000859.1-201ENST00000525536 307 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 MIR5708-201ENST00000579723 85 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 FAM27B-201ENST00000610601 213 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 AC087821.2-201ENST00000637086 450 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 ZNF663P-202ENST00000641770 1131 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 NCLP2-201ENST00000416078 1462 ntBASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AC006484.1-201ENST00000435086 1884 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 SNORD116.1-201ENST00000365628 92 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 RNU6-83P-201ENST00000384568 112 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 MIR195-201ENST00000385194 87 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AL590084.1-201ENST00000407885 387 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AC114755.2-201ENST00000413520 361 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AL009174.1-201ENST00000426577 416 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 RBMY2QP-201ENST00000429799 1147 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms