Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 AC004951.3-201ENST00000418645 1148 ntBASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 SLC25A1P4-201ENST00000567977 778 ntBASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 AC011298.2-201ENST00000617989 482 ntBASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SSX2IPQ9Y2D8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 DUX4L26-201ENST00000489078 1255 ntBASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 RCC2P6-201ENST00000526625 1557 ntBASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSX2IPQ9Y2D8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 HLA-A-209ENST00000638375 975 ntBASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSX2IPQ9Y2D8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 FAM207BP-201ENST00000447172 505 ntBASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 ECEL1P2-202ENST00000465689 757 ntBASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 AC010203.1-204ENST00000548782 407 ntBASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSX2IPQ9Y2D8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms