Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NCDNQ9UBB6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.25■□□□□ 0.67
NCDNQ9UBB6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.25■□□□□ 0.67
NCDNQ9UBB6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.25■□□□□ 0.67
NCDNQ9UBB6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
NCDNQ9UBB6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCDNQ9UBB6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCDNQ9UBB6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCDNQ9UBB6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.25■□□□□ 0.67
NCDNQ9UBB6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 AC244015.2-201ENST00000616358 1861 ntBASIC19.24■□□□□ 0.67
NCDNQ9UBB6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 TFP1-202ENST00000475455 1573 ntBASIC19.24■□□□□ 0.67
NCDNQ9UBB6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 AP003041.3-201ENST00000527151 707 ntBASIC19.24■□□□□ 0.67
NCDNQ9UBB6 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.24■□□□□ 0.67
NCDNQ9UBB6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCDNQ9UBB6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 UNC93B7-201ENST00000509439 705 ntBASIC19.23■□□□□ 0.67
NCDNQ9UBB6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.23■□□□□ 0.67
NCDNQ9UBB6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCDNQ9UBB6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.22■□□□□ 0.67
NCDNQ9UBB6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 HYMAI.1-201ENST00000620949 238 ntBASIC19.22■□□□□ 0.67
NCDNQ9UBB6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.22■□□□□ 0.67
NCDNQ9UBB6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 AC009078.2-202ENST00000463353 338 ntBASIC19.21■□□□□ 0.67
NCDNQ9UBB6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms