Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SSU72Q9NP77 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSU72Q9NP77 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.24■□□□□ 0.67
SSU72Q9NP77 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.24■□□□□ 0.67
SSU72Q9NP77 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SSU72Q9NP77 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SSU72Q9NP77 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SSU72Q9NP77 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSU72Q9NP77 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.24■□□□□ 0.67
SSU72Q9NP77 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSU72Q9NP77 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SSU72Q9NP77 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.24■□□□□ 0.67
SSU72Q9NP77 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSU72Q9NP77 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSU72Q9NP77 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSU72Q9NP77 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSU72Q9NP77 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSU72Q9NP77 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.23■□□□□ 0.67
SSU72Q9NP77 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.23■□□□□ 0.67
SSU72Q9NP77 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSU72Q9NP77 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSU72Q9NP77 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSU72Q9NP77 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SSU72Q9NP77 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.23■□□□□ 0.67
SSU72Q9NP77 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SSU72Q9NP77 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.23■□□□□ 0.67
SSU72Q9NP77 SDHAP1-207ENST00000440850 2000 ntBASIC19.23■□□□□ 0.67
SSU72Q9NP77 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SSU72Q9NP77 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSU72Q9NP77 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.23■□□□□ 0.67
SSU72Q9NP77 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSU72Q9NP77 AC005332.8-201ENST00000622750 2735 ntBASIC19.23■□□□□ 0.67
SSU72Q9NP77 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SSU72Q9NP77 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.22■□□□□ 0.67
SSU72Q9NP77 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.22■□□□□ 0.67
SSU72Q9NP77 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.22■□□□□ 0.67
SSU72Q9NP77 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SSU72Q9NP77 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.22■□□□□ 0.67
SSU72Q9NP77 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.22■□□□□ 0.67
SSU72Q9NP77 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 AL355472.2-201ENST00000422958 438 ntBASIC19.22■□□□□ 0.67
SSU72Q9NP77 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SSU72Q9NP77 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.22■□□□□ 0.67
SSU72Q9NP77 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.22■□□□□ 0.67
SSU72Q9NP77 AC069236.1-201ENST00000604339 616 ntBASIC19.22■□□□□ 0.67
SSU72Q9NP77 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.22■□□□□ 0.67
SSU72Q9NP77 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SSU72Q9NP77 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.22■□□□□ 0.67
SSU72Q9NP77 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.22■□□□□ 0.67
SSU72Q9NP77 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.22■□□□□ 0.67
SSU72Q9NP77 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSU72Q9NP77 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSU72Q9NP77 AC020916.1-201ENST00000587762 1774 ntBASIC19.21■□□□□ 0.67
SSU72Q9NP77 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.21■□□□□ 0.67
SSU72Q9NP77 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSU72Q9NP77 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SSU72Q9NP77 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSU72Q9NP77 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSU72Q9NP77 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.21■□□□□ 0.67
SSU72Q9NP77 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSU72Q9NP77 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSU72Q9NP77 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.21■□□□□ 0.67
SSU72Q9NP77 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.21■□□□□ 0.67
SSU72Q9NP77 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.21■□□□□ 0.67
SSU72Q9NP77 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.21■□□□□ 0.67
SSU72Q9NP77 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.21■□□□□ 0.67
SSU72Q9NP77 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SSU72Q9NP77 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SSU72Q9NP77 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSU72Q9NP77 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.21■□□□□ 0.67
SSU72Q9NP77 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSU72Q9NP77 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SSU72Q9NP77 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.21■□□□□ 0.67
SSU72Q9NP77 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSU72Q9NP77 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSU72Q9NP77 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSU72Q9NP77 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSU72Q9NP77 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSU72Q9NP77 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
SSU72Q9NP77 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.2■□□□□ 0.66
SSU72Q9NP77 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms